ENCFF379KTQ

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR003SZJ
Description: Part of ENCODE experiment ENCSR003SZJ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 261.00 64.76 1.18 100.0 MIR652-201 miRNA stomach (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 4.00 80.00 0.02 100.0 MIR653-201 miRNA stomach (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 2933.00 83.63 13.27 100.0 MIR140-201 miRNA stomach (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 35.00 3.05 0.16 100.0 MIR106B-201 miRNA stomach (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 503.00 43.85 2.28 57.09 MIR106B-201 miRNA stomach (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 430.00 58.50 1.95 100.0 SNORD41-201 snoRNA stomach (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 1201.00 0.62 5.43 4.27 MT-TF-201 Mt tRNA stomach (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 14732.00 7.65 66.65 100.0 MT-TF-201 Mt tRNA stomach (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 70648.00 36.69 319.60 66.47 MT-TF-201 Mt tRNA stomach (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 17029.00 69.28 77.04 100.0 MT-TV-201 Mt tRNA stomach (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 8745.00 21.22 39.56 86.47 MT-RNR2-201 Mt rRNA stomach (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 744.00 1.81 3.37 100.0 MT-RNR2-201 Mt rRNA stomach (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 233.00 0.57 1.05 100.0 MT-RNR2-201 Mt rRNA stomach (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 247.00 0.60 1.12 100.0 MT-RNR2-201 Mt rRNA stomach (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 7246.00 17.58 32.78 88.27 MT-RNR2-201 Mt rRNA stomach (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 67.00 0.16 0.30 100.0 MT-RNR2-201 Mt rRNA stomach (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 28.00 0.07 0.13 100.0 MT-RNR2-201 Mt rRNA stomach (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 1100.00 6.93 4.98 100.0 MT-TI-201 Mt tRNA stomach (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 10577.00 66.65 47.85 98.71 MT-TI-201 Mt tRNA stomach (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 19117.50 21.19 86.49 55.12 MT-TQ-201 Mt tRNA stomach (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 61.00 0.07 0.28 100.0 MT-TQ-201 Mt tRNA stomach (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 42657.00 47.29 192.97 93.6 MT-TQ-201 Mt tRNA stomach (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 13506.25 14.97 61.10 65.04 MT-TQ-201 Mt tRNA stomach (Tissue)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 52709.00 17.53 238.45 100.0 MT-TM-201 Mt tRNA stomach (Tissue)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 231302.00 76.93 1046.38 94.94 MT-TM-201 Mt tRNA stomach (Tissue)