ENCFF379KTQ

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR003SZJ
Description: Part of ENCODE experiment ENCSR003SZJ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 280.00 77.56 1.27 100.0 MIR500A-201 miRNA stomach (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 19186.00 16.18 86.79 79.93 MIR30A-201 miRNA stomach (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 86089.00 72.62 389.46 94.7 MIR30A-201 miRNA stomach (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 6092.00 5.14 27.56 100.0 MIR30A-201 miRNA stomach (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 933.00 0.79 4.22 100.0 MIR30A-201 miRNA stomach (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 562.00 0.65 2.54 100.0 MIR27B-201 miRNA stomach (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 79676.00 92.05 360.44 95.1 MIR27B-201 miRNA stomach (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 2.00 66.67 0.01 100.0 MIR196A2-201 miRNA stomach (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 157.00 67.38 0.71 100.0 MIR577-201 miRNA stomach (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 155.00 79.90 0.70 86.11 MIR654-201 miRNA stomach (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 886.00 89.59 4.01 98.12 MIR204-201 miRNA stomach (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 1262.00 91.65 5.71 100.0 MIR152-201 miRNA stomach (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 4432.00 90.04 20.05 100.0 MIR30C1-201 miRNA stomach (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 219.00 83.59 0.99 100.0 MIR660-201 miRNA stomach (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 3670.00 73.15 16.60 84.31 MIR125B1-201 miRNA stomach (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 227.00 4.52 1.03 100.0 MIR125B1-201 miRNA stomach (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 22.00 27.85 0.10 100.0 MIR493-201 miRNA stomach (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 46.00 58.23 0.21 100.0 MIR493-201 miRNA stomach (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 40805.11 28.48 184.60 31.64 MIR182-201 miRNA stomach (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 76449.69 53.36 345.85 58.2 MIR182-201 miRNA stomach (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 5879.00 83.90 26.60 87.52 MIR100-201 miRNA stomach (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 101.00 91.82 0.46 100.0 MIR301A-201 miRNA stomach (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 4965.00 91.05 22.46 95.92 MIR130A-201 miRNA stomach (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 448.00 8.22 2.03 44.49 MIR130A-201 miRNA stomach (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 237748.00 97.51 1075.54 98.21 MIRLET7F2-201 miRNA stomach (Tissue)