ENCFF379KTQ
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | stomach (Tissue) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR003SZJ |
| Description: | Part of ENCODE experiment ENCSR003SZJ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000387405.1 | ENST00000387405.1_1_24_+ | 1–24 | 383.00 | 17.81 | 1.73 | 100.0 | MT-TC-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_56_+ | 1–56 | 192.00 | 0.23 | 0.87 | 100.0 | MT-TY-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_37_+ | 1–37 | 4045.00 | 4.80 | 18.30 | 78.36 | MT-TY-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_50_+ | 1–50 | 4921.00 | 5.84 | 22.26 | 100.0 | MT-TY-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_32_+ | 1–32 | 8791.00 | 10.44 | 39.77 | 86.97 | MT-TY-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_65_+ | 1–65 | 41807.00 | 49.65 | 189.13 | 100.0 | MT-TY-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_28_+ | 1–28 | 13984.00 | 16.61 | 63.26 | 100.0 | MT-TY-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387419.1 | ENST00000387419.1_1_51_+ | 1–51 | 14008.00 | 79.44 | 63.37 | 100.0 | MT-TD-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_58_+ | 1–58 | 20282.00 | 3.49 | 91.75 | 100.0 | MT-TK-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_52_+ | 1–52 | 529618.00 | 91.25 | 2395.92 | 100.0 | MT-TK-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_28_+ | 1–28 | 641.00 | 0.11 | 2.90 | 100.0 | MT-TK-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_31_+ | 1–31 | 10994.00 | 1.89 | 49.74 | 100.0 | MT-TK-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387449.1 | ENST00000387449.1_1_26_+ | 1–26 | 927.00 | 14.52 | 4.19 | 100.0 | MT-TS2-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387449.1 | ENST00000387449.1_1_53_+ | 1–53 | 10.00 | 0.16 | 0.05 | 100.0 | MT-TS2-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387449.1 | ENST00000387449.1_1_20_+ | 1–20 | 1452.00 | 22.75 | 6.57 | 71.21 | MT-TS2-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387456.1 | ENST00000387456.1_1_31_+ | 1–31 | 2411.00 | 24.84 | 10.91 | 100.0 | MT-TL2-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_24_69_+ | 24–69 | 28.00 | 0.02 | 0.13 | 100.0 | MT-TE-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_1_69_+ | 1–69 | 84837.00 | 71.44 | 383.79 | 89.56 | MT-TE-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_13_67_+ | 13–67 | 349.00 | 0.29 | 1.58 | 100.0 | MT-TE-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_1_62_+ | 1–62 | 1231.00 | 1.04 | 5.57 | 83.63 | MT-TE-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_1_57_+ | 1–57 | 2357.00 | 1.98 | 10.66 | 100.0 | MT-TE-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_40_67_+ | 40–67 | 3481.00 | 2.93 | 15.75 | 89.33 | MT-TE-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_39_69_+ | 39–69 | 416.00 | 0.35 | 1.88 | 12.12 | MT-TE-201 | Mt tRNA | stomach (Tissue) |
| ENST00000389680.2 | ENST00000389680.2_316_354_+ | 316–354 | 8113.00 | 59.25 | 36.70 | 100.0 | MT-RNR1-201 | Mt rRNA | stomach (Tissue) |
| ENST00000390180.1 | ENST00000390180.1_64_86_+ | 64–86 | 168.00 | 80.00 | 0.76 | 100.0 | MIR454-201 | miRNA | stomach (Tissue) |