ENCFF338AVU

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR646HQQ
Description: Part of ENCODE experiment ENCSR646HQQ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 729.00 21.32 2.17 100.0 LINC02422-207 lncRNA gastroesophageal sphincter (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 1187.00 14.45 3.53 100.0 ENST00000753088 lncRNA gastroesophageal sphincter (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 67.00 0.82 0.20 100.0 ENST00000753088 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 2479.37 2.80 7.38 56.85 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 16788.00 18.98 49.99 100.0 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 3527.00 3.99 10.50 100.0 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 1308.00 1.48 3.89 100.0 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 4455.67 5.04 13.27 39.8 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 7067.09 7.99 21.04 59.13 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 4651.35 5.26 13.85 31.32 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 1305.97 1.48 3.89 39.67 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 2601.00 2.94 7.74 100.0 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 12858.31 14.54 38.29 69.96 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 12.00 0.61 0.04 100.0 ENST00000756452 lncRNA gastroesophageal sphincter (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 2914.00 30.42 8.68 100.0 ENST00000760093 lncRNA gastroesophageal sphincter (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 425.00 4.44 1.27 100.0 ENST00000760093 lncRNA gastroesophageal sphincter (Tissue)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 152311.00 93.64 453.51 96.02 SNHG14-356 lncRNA gastroesophageal sphincter (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 5094.00 13.74 15.17 76.6 LINC02806-241 lncRNA gastroesophageal sphincter (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 413.00 1.11 1.23 100.0 LINC02806-241 lncRNA gastroesophageal sphincter (Tissue)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 10.00 0.03 0.03 100.0 LINC02806-241 lncRNA gastroesophageal sphincter (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 14855.00 40.06 44.23 81.72 LINC02806-241 lncRNA gastroesophageal sphincter (Tissue)
ENST00000762395.1 ENST00000762395.1_307_324_+ 307–324 30.00 0.08 0.09 100.0 LINC02806-241 lncRNA gastroesophageal sphincter (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 5657.00 96.50 16.84 100.0 EHBP1-AS1-210 lncRNA gastroesophageal sphincter (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 1461.00 22.34 4.35 100.0 ENST00000770398 lncRNA gastroesophageal sphincter (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 3483.00 53.27 10.37 100.0 ENST00000770398 lncRNA gastroesophageal sphincter (Tissue)