ENCFF316MTC

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 573.00 8.91 3.68 44.94 RACK1-229 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 12.00 0.19 0.08 100.0 RACK1-229 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 526.79 8.19 3.38 54.65 RACK1-229 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 446.18 6.94 2.86 44.75 RACK1-229 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 272.00 9.77 1.75 88.31 RACK1-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 43.00 1.55 0.28 60.56 RACK1-230 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 62.00 4.80 0.40 100.0 RNA5SP486-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 1295.00 87.09 8.31 100.0 SCARNA5-201 scaRNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 19.00 0.04 0.12 100.0 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 30.00 0.06 0.19 34.09 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 35035.00 65.81 224.92 93.98 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 4.00 0.01 0.03 100.0 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 73.00 0.14 0.47 79.35 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 941.00 1.77 6.04 100.0 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 2947.00 5.54 18.92 56.77 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 1.00 0.00 0.01 100.0 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 348.00 0.65 2.23 26.54 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 2952.00 5.54 18.95 99.36 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 10.00 0.02 0.06 100.0 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 8.00 0.02 0.05 100.0 RNY4-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 74.00 52.48 0.48 93.67 MIR3142HG-201 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 1.00 0.22 0.01 100.0 SNHG6-204 retained intron trophoblast cell (In vitro differentiated cells)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 103473.00 33.30 664.27 100.0 MIR151A-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 173494.00 55.84 1113.78 86.04 MIR151A-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 2923.00 99.25 18.76 100.0 DENND3-221 protein coding trophoblast cell (In vitro differentiated cells)