ENCFF316MTC

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 1.00 2.08 0.01 100.0 HCN2-201 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 137.00 8.31 0.88 100.0 ATP5MC3-201 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 221.00 86.67 1.42 100.0 CDC25A-201 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 43.00 58.90 0.28 100.0 BLOC1S4-201 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 7.00 3.24 0.04 100.0 ATAD5-201 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 25.00 3.23 0.16 100.0 SLITRK5-201 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 17.00 35.42 0.11 100.0 HASPIN-201 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 3693.00 95.70 23.71 100.0 ATG101-201 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 376.00 84.30 2.41 100.0 PRICKLE1-201 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 2778.00 97.51 17.83 99.82 MIR133A2-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 52.00 22.61 0.33 100.0 PBLD-204 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 3.00 0.28 0.02 75.0 MIRLET7BHG-201 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 908.00 85.98 5.83 99.56 MIRLET7BHG-201 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 97.00 2.09 0.62 76.98 MIR375-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 4490.00 96.79 28.82 99.12 MIR375-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 84910.00 88.29 545.10 100.0 MIR30E-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 9411.00 9.79 60.42 100.0 MIR30E-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 808.00 63.27 5.19 100.0 MIR29A-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 6313.00 92.73 40.53 100.0 MIR345-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 160249.00 98.72 1028.76 100.0 MIR16-2-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 356.00 3.70 2.29 100.0 MIR340-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 9003.00 93.58 57.80 100.0 MIR340-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 9220.00 82.16 59.19 100.0 MIR107-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 30.00 81.08 0.19 85.71 MIR381-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362154.1 ENST00000362154.1_48_70_+ 48–70 118133.00 93.24 758.38 97.72 MIR103A2-201 miRNA trophoblast cell (In vitro differentiated cells)