ENCFF316MTC

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 28.00 100.00 0.18 100.0 MIR889-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 1.00 0.09 0.01 100.0 SNORD88A-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 3509.00 97.77 22.53 100.0 MIR548K-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 679.00 49.53 4.36 100.0 MIR320B2-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 35.00 81.40 0.22 100.0 MIR1271-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 3256.00 30.94 20.90 100.0 SNORD100-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 201.00 1.91 1.29 100.0 SNORD100-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 940.00 8.93 6.03 100.0 SNORD100-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 1234.00 11.73 7.92 100.0 SNORD100-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 1016.00 60.08 6.52 100.0 SNORD111B-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 3.00 0.29 0.02 100.0 RNU2-36P-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 208.00 19.77 1.34 100.0 RNU2-36P-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 1178.00 20.64 7.56 100.0 SNORD19C-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 1861.00 32.61 11.95 94.08 SNORD19C-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 10516.00 58.87 67.51 100.0 SNORD12B-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 1.00 0.01 0.01 100.0 SNORD12B-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 377.00 2.11 2.42 96.17 SNORD12B-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 270.00 47.87 1.73 100.0 Y_RNA.612-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 2.00 0.35 0.01 100.0 SNORD71-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 97.00 16.96 0.62 100.0 SNORD71-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 20.00 3.50 0.13 95.24 SNORD71-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 17670.00 74.50 113.44 81.11 MIR194-2HG-201 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 5088.00 21.45 32.66 62.03 MIR194-2HG-201 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 7051.00 99.70 45.27 100.0 RPS7P15-201 processed pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 1.00 0.01 0.01 100.0 SNORD62B-201 snoRNA trophoblast cell (In vitro differentiated cells)