ENCFF316MTC

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 693.00 84.00 4.45 100.0 MIR509-3-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 1.00 50.00 0.01 100.0 MIR543-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 4868.00 92.55 31.25 100.0 MIR301B-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 579.00 38.78 3.72 83.79 RNU1-82P-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 1.00 0.04 0.01 100.0 SNORD66-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 1.00 0.04 0.01 100.0 SNORD66-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 2.00 0.09 0.01 100.0 SNORD66-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 882.00 37.95 5.66 59.55 SNORD66-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 4674.00 80.48 30.01 100.0 U3.17-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 1441.00 55.36 9.25 100.0 SNORD17-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 1.00 0.03 0.01 100.0 SNORD72-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 1.00 0.33 0.01 100.0 SNORD70B-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 826.00 18.74 5.30 99.16 RNY4P18-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 5.00 0.81 0.03 100.0 SNORD90-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 8.00 1.29 0.05 72.73 SNORD90-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 2408.00 25.10 15.46 100.0 SNORD69-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 1810.00 18.87 11.62 100.0 SNORD69-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 524.00 5.46 3.36 100.0 SNORD69-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 447.00 4.66 2.87 100.0 SNORD69-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 4.00 0.48 0.03 100.0 SNORD70-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 4.00 0.04 0.03 100.0 B4GALNT2-202 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 6760.00 74.69 43.40 80.85 B4GALNT2-202 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 9140.00 91.16 58.68 100.0 NDE1-202 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 254.00 35.62 1.63 100.0 MIR450B-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 1169.00 65.31 7.50 100.0 MIR887-201 miRNA trophoblast cell (In vitro differentiated cells)