ENCFF310THB

Library Details

Organism: Homo Sapiens
Biosample: vagina (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR812JEU
Description: Part of ENCODE experiment ENCSR812JEU. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's vagina tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 743.00 92.88 3.07 99.07 MIR181C-201 miRNA vagina (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 18.00 75.00 0.07 100.0 MIR194-1-201 miRNA vagina (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 93.00 78.81 0.38 80.17 MIR128-2-201 miRNA vagina (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 4465.00 77.83 18.46 86.25 MIR99A-201 miRNA vagina (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 90092.00 88.49 372.56 91.6 MIR28-201 miRNA vagina (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 580.00 0.57 2.40 87.88 MIR28-201 miRNA vagina (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 1527.00 1.50 6.31 100.0 MIR28-201 miRNA vagina (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 124.00 63.92 0.51 100.0 MIR183-201 miRNA vagina (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 337.00 1.81 1.39 100.0 MIR145-201 miRNA vagina (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 16953.00 90.85 70.11 100.0 MIR145-201 miRNA vagina (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 2673.00 97.06 11.05 98.31 MIR186-201 miRNA vagina (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 226.00 78.20 0.93 100.0 MIR200B-201 miRNA vagina (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 32.00 27.12 0.13 100.0 MIR218-1-201 miRNA vagina (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 1812.00 88.69 7.49 92.78 MIR181B2-201 miRNA vagina (Tissue)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 10.00 62.50 0.04 100.0 MIR495-201 miRNA vagina (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 2438376.00 88.05 10083.54 88.67 MIR10B-201 miRNA vagina (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 35.76 37.25 0.15 57.68 MIR130B-201 miRNA vagina (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 41.10 42.82 0.17 48.36 MIR130B-201 miRNA vagina (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 4.00 4.17 0.02 100.0 MIR130B-201 miRNA vagina (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 1607.00 22.29 6.65 100.0 MIR199A1-201 miRNA vagina (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 18.00 94.74 0.07 100.0 MIR487B-201 miRNA vagina (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 375.46 72.62 1.55 76.78 MIR93-201 miRNA vagina (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 91.24 17.65 0.38 20.69 MIR93-201 miRNA vagina (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 396.00 83.90 1.64 92.74 MIR532-201 miRNA vagina (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 42.00 80.77 0.17 100.0 MIR15B-201 miRNA vagina (Tissue)