ENCFF310THB

Library Details

Organism: Homo Sapiens
Biosample: vagina (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR812JEU
Description: Part of ENCODE experiment ENCSR812JEU. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's vagina tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 29.00 2.96 0.12 100.0 RNVU1-7-201 snRNA vagina (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 122.00 67.40 0.50 100.0 Y_RNA.389-201 misc RNA vagina (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 50738.00 89.17 209.82 99.0 SNORD101-201 snoRNA vagina (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 275.00 0.48 1.14 100.0 SNORD101-201 snoRNA vagina (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 450.00 0.79 1.86 100.0 SNORD101-201 snoRNA vagina (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 27848.00 96.80 115.16 100.0 SNORD37-201 snoRNA vagina (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 61710.00 98.07 255.19 100.0 SNORD59A-201 snoRNA vagina (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 1519.00 85.39 6.28 100.0 SNORA7B-201 snoRNA vagina (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 35.00 19.55 0.14 100.0 Y_RNA.555-201 misc RNA vagina (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 6964.00 92.50 28.80 93.56 MIR25-201 miRNA vagina (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 18874.00 91.59 78.05 96.84 MIR99B-201 miRNA vagina (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 7520.00 46.51 31.10 76.5 MIR23B-201 miRNA vagina (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 8204.00 50.74 33.93 65.99 MIR23B-201 miRNA vagina (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 6487.00 92.35 26.83 100.0 MIR203A-201 miRNA vagina (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 483.00 8.09 2.00 100.0 MIR199B-201 miRNA vagina (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 4343.00 72.78 17.96 83.04 MIR199B-201 miRNA vagina (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 1597.00 92.10 6.60 100.0 MIR30B-201 miRNA vagina (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 461.00 93.13 1.91 100.0 MIR181D-201 miRNA vagina (Tissue)
ENST00000384857.1 ENST00000384857.1_61_83_+ 61–83 3.00 60.00 0.01 100.0 MIR508-201 miRNA vagina (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 13.00 100.00 0.05 100.0 MIR215-201 miRNA vagina (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 269.00 0.65 1.11 100.0 MIR181A2-201 miRNA vagina (Tissue)
ENST00000384872.3 ENST00000384872.3_53_74_+ 53–74 2.00 100.00 0.01 100.0 MIR206-201 miRNA vagina (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 34770.00 98.38 143.79 99.21 MIR191-201 miRNA vagina (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 119.00 83.22 0.49 88.15 MIR149-201 miRNA vagina (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 30.00 3.75 0.12 100.0 MIR181C-201 miRNA vagina (Tissue)