ENCFF310THB

Library Details

Organism: Homo Sapiens
Biosample: vagina (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR812JEU
Description: Part of ENCODE experiment ENCSR812JEU. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's vagina tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 683.00 84.74 2.82 100.0 MIR150-201 miRNA vagina (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 47.00 55.29 0.19 100.0 MIR542-201 miRNA vagina (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 8.00 3.79 0.03 100.0 MIR500A-201 miRNA vagina (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 167.00 79.15 0.69 100.0 MIR500A-201 miRNA vagina (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 2607.00 12.83 10.78 78.38 MIR30A-201 miRNA vagina (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 121.00 0.60 0.50 100.0 MIR30A-201 miRNA vagina (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 15696.00 77.26 64.91 95.62 MIR30A-201 miRNA vagina (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 911.00 4.48 3.77 100.0 MIR30A-201 miRNA vagina (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 37155.00 88.58 153.65 93.87 MIR27B-201 miRNA vagina (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 429.00 1.02 1.77 100.0 MIR27B-201 miRNA vagina (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 128.00 84.21 0.53 100.0 MIR196A2-201 miRNA vagina (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 16.00 61.54 0.07 100.0 MIR577-201 miRNA vagina (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 257.00 77.41 1.06 83.71 MIR654-201 miRNA vagina (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 856.00 95.64 3.54 97.72 MIR204-201 miRNA vagina (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 1085.00 92.89 4.49 100.0 MIR152-201 miRNA vagina (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 1122.00 90.48 4.64 100.0 MIR30C1-201 miRNA vagina (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 30.00 81.08 0.12 100.0 MIR660-201 miRNA vagina (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 265.00 1.55 1.10 100.0 MIR125B1-201 miRNA vagina (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 13423.00 78.36 55.51 85.23 MIR125B1-201 miRNA vagina (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 4.00 20.00 0.02 100.0 MIR493-201 miRNA vagina (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 12.00 60.00 0.05 100.0 MIR493-201 miRNA vagina (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 3650.21 20.82 15.09 27.62 MIR182-201 miRNA vagina (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 10386.13 59.24 42.95 63.96 MIR182-201 miRNA vagina (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 8884.00 86.03 36.74 89.39 MIR100-201 miRNA vagina (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 87.00 92.55 0.36 100.0 MIR301A-201 miRNA vagina (Tissue)