ENCFF299ETH

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 3152.72 24.20 32.67 70.53 RNY1-201 misc RNA OCI-LY7 (Cell line)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 520.62 1.50 5.39 11.92 RNA5SP202-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 679.03 1.96 7.04 33.6 RNA5SP202-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 1062.00 3.07 11.00 100.0 RNA5SP202-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 63.00 0.18 0.65 100.0 RNA5SP202-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 1782.00 5.15 18.46 100.0 RNA5SP202-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 1291.52 3.73 13.38 61.27 RNA5SP202-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 204.00 0.59 2.11 100.0 RNA5SP202-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 914.00 2.64 9.47 100.0 RNA5SP202-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 124.00 0.36 1.28 100.0 RNA5SP202-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 36001.00 80.02 373.01 100.0 Y_RNA.234-201 misc RNA OCI-LY7 (Cell line)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 3.00 0.00 0.03 100.0 RNA5S9-201 rRNA OCI-LY7 (Cell line)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 1283.00 5.69 13.29 100.0 RNA5SP141-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 336.00 76.54 3.48 100.0 ENST00000364722 snoRNA OCI-LY7 (Cell line)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 3163.00 68.69 32.77 100.0 SNORD52-201 snoRNA OCI-LY7 (Cell line)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 459.00 26.58 4.76 39.95 SNORD117-201 snoRNA OCI-LY7 (Cell line)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 708.00 41.00 7.34 60.67 SNORD117-201 snoRNA OCI-LY7 (Cell line)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 7.00 0.12 0.07 100.0 RNA5SP298-201 rRNA pseudogene OCI-LY7 (Cell line)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 195.00 1.47 2.02 100.0 SNORD38A-201 snoRNA OCI-LY7 (Cell line)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 11612.00 87.55 120.31 100.0 SNORD38A-201 snoRNA OCI-LY7 (Cell line)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 646.00 4.87 6.69 100.0 SNORD38A-201 snoRNA OCI-LY7 (Cell line)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 6632.00 4.47 68.71 100.0 7SK.1-201 misc RNA OCI-LY7 (Cell line)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 6164.00 4.15 63.87 96.34 7SK.1-201 misc RNA OCI-LY7 (Cell line)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 24.00 0.02 0.25 100.0 7SK.1-201 misc RNA OCI-LY7 (Cell line)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 38310.00 25.82 396.93 84.3 7SK.1-201 misc RNA OCI-LY7 (Cell line)