ENCFF299ETH

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 244.00 3.07 2.53 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 327.00 15.96 3.39 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 496.00 24.21 5.14 59.98 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 153.00 8.42 1.59 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 160.00 4.90 1.66 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 1.00 0.03 0.01 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 1.00 0.03 0.01 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 77.00 2.36 0.80 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 1207.00 36.97 12.51 89.01 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 93.00 5.48 0.96 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 541.00 19.06 5.61 74.21 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 16.00 1.09 0.17 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 1442.00 62.42 14.94 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 52.00 2.25 0.54 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 1.00 0.04 0.01 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 204.00 0.51 2.11 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 33.00 45.21 0.34 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 38.00 13.52 0.39 80.85 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 6.00 2.14 0.06 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 9.00 3.20 0.09 19.15 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 373.00 28.43 3.86 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 5.00 0.38 0.05 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 14.00 9.79 0.15 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 15.00 41.67 0.16 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 3.00 6.82 0.03 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA OCI-LY7 (Cell line)