ENCFF299ETH

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 41.00 0.08 0.42 89.13 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 2639.00 5.42 27.34 49.96 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 777.00 1.60 8.05 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 31.00 0.06 0.32 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 4.00 6.78 0.04 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 515.00 5.91 5.34 89.88 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 19.00 30.16 0.20 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 1.00 1.59 0.01 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 36.00 45.00 0.37 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 99.00 5.83 1.03 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 4.00 0.05 0.04 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 89.00 1.02 0.92 15.03 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 3.00 0.45 0.03 1.8 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 164.00 24.81 1.70 100.0 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 757.00 39.72 7.84 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 3328.00 7.00 34.48 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 9340.00 19.63 96.77 83.8 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 30.00 9.97 0.31 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 14.00 5.15 0.15 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 9.00 0.11 0.09 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 3434.00 43.23 35.58 90.32 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 19.00 0.24 0.20 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 371.00 4.67 3.84 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 54.00 0.68 0.56 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 864.00 10.88 8.95 48.73 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA OCI-LY7 (Cell line)