ENCFF299ETH

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 3869.00 50.20 40.09 85.71 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 154.00 3.77 1.60 45.03 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 11.00 11.11 0.11 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 1.00 0.43 0.01 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 4.00 1.15 0.04 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 52.00 29.55 0.54 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 19.00 55.88 0.20 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 5333.00 63.75 55.26 92.6 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 48.00 0.57 0.50 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 420.00 7.04 4.35 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 658.00 62.55 6.82 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 26.00 2.81 0.27 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 769.00 11.24 7.97 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 1046.00 15.28 10.84 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA OCI-LY7 (Cell line)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 56.00 0.82 0.58 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA OCI-LY7 (Cell line)