ENCFF299ETH

Library Details

Organism: Homo Sapiens
Biosample: OCI-LY7 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR740DKM
Description: Part of ENCODE experiment ENCSR740DKM. The libraries contained in this experiment come from independent growths of cell line, Oci-Ly-7. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_1641_1722_+ 1641–1722 1.00 0.00 0.01 100.0 GAS5-230 retained intron OCI-LY7 (Cell line)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 337.00 0.13 3.49 100.0 GAS5-230 retained intron OCI-LY7 (Cell line)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 1.00 12.50 0.01 100.0 FTX-219 lncRNA OCI-LY7 (Cell line)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 2.00 25.00 0.02 66.67 FTX-219 lncRNA OCI-LY7 (Cell line)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 18.00 1.11 0.19 25.71 CTC1-214 protein coding OCI-LY7 (Cell line)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 108.00 6.64 1.12 67.08 CTC1-214 protein coding OCI-LY7 (Cell line)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 72.00 4.43 0.75 21.56 CTC1-214 protein coding OCI-LY7 (Cell line)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 52.00 3.20 0.54 74.29 CTC1-214 protein coding OCI-LY7 (Cell line)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 428.00 26.32 4.43 92.84 CTC1-214 protein coding OCI-LY7 (Cell line)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 110.00 6.77 1.14 100.0 CTC1-214 protein coding OCI-LY7 (Cell line)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 209.00 12.85 2.17 100.0 CTC1-214 protein coding OCI-LY7 (Cell line)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 179.00 11.01 1.85 100.0 CTC1-214 protein coding OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 62.00 0.32 0.64 82.67 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 971.00 5.00 10.06 99.39 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 112.00 0.58 1.16 100.0 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 130.00 0.67 1.35 14.89 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 20.00 0.10 0.21 100.0 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 88.00 0.45 0.91 100.0 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 725.00 3.74 7.51 100.0 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 37.00 0.19 0.38 100.0 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 240.00 1.24 2.49 100.0 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 13140.00 67.71 136.14 99.27 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 263.00 1.36 2.72 100.0 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 156.00 0.80 1.62 23.78 ENST00000651540 lncRNA OCI-LY7 (Cell line)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 344.00 11.42 3.56 100.0 MIRLET7A1HG-203 lncRNA OCI-LY7 (Cell line)