ENCFF295DXJ

Library Details

Organism: Homo Sapiens
Biosample: smooth muscle cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR250STJ
Description: Part of ENCODE experiment ENCSR250STJ. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a smooth muscle pathway. They are stranded SE101 length Hi-Seq reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 8849.00 86.74 10.39 97.46 MIR30D-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 117.00 18.28 0.14 99.15 MIR126-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 507.00 79.22 0.60 100.0 MIR126-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 70.00 44.59 0.08 100.0 MIR374A-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 4904.00 77.22 5.76 100.0 MIR31-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 1183.00 0.11 1.39 70.37 RNA5S12-201 rRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 1358.00 0.12 1.59 80.17 RNA5S12-201 rRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 251.00 0.02 0.29 100.0 RNA5S12-201 rRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 1684.00 0.15 1.98 64.05 RNA5S12-201 rRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 33.00 0.00 0.04 100.0 RNA5S12-201 rRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 455.55 0.04 0.53 37.93 RNA5S12-201 rRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 5080.00 0.46 5.96 91.68 RNA5S12-201 rRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 1114.00 0.10 1.31 53.64 RNA5S12-201 rRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 191.00 0.02 0.22 60.83 RNA5S12-201 rRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 234.00 0.02 0.27 100.0 RNA5S12-201 rRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 397.28 0.04 0.47 47.18 RNA5S12-201 rRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 1136.71 0.10 1.33 72.59 RNA5S12-201 rRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 330.00 0.03 0.39 38.28 RNA5S12-201 rRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 479.00 0.04 0.56 78.14 RNA5S12-201 rRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 655.55 0.06 0.77 57.05 RNA5S12-201 rRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 1535.00 0.14 1.80 71.53 RNA5S12-201 rRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 2397.00 0.22 2.81 82.86 RNA5S12-201 rRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 999852.00 91.51 1173.83 99.95 RNA5S12-201 rRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 1837.00 0.17 2.16 77.54 RNA5S12-201 rRNA smooth muscle cell (In vitro differentiated cells)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 438.00 13.68 0.51 100.0 Y_RNA.14-201 misc RNA smooth muscle cell (In vitro differentiated cells)