ENCFF295DXJ

Library Details

Organism: Homo Sapiens
Biosample: smooth muscle cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR250STJ
Description: Part of ENCODE experiment ENCSR250STJ. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a smooth muscle pathway. They are stranded SE101 length Hi-Seq reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 236.00 16.26 0.28 100.0 MIR181C-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 55.00 88.71 0.06 100.0 MIR194-1-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 333.00 69.96 0.39 75.68 MIR128-2-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 24.00 82.76 0.03 100.0 MIR99A-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 1138.00 4.42 1.34 92.6 MIR28-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 22287.00 86.52 26.16 93.1 MIR28-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 308.00 1.20 0.36 100.0 MIR28-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 784.00 68.17 0.92 100.0 MIR183-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 517.00 50.69 0.61 100.0 MIR145-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 205.00 20.10 0.24 100.0 MIR145-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 5667.00 96.08 6.65 98.03 MIR186-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 388.00 97.98 0.46 100.0 MIR200B-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 117.00 69.23 0.14 100.0 MIR218-1-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 68063.00 93.07 79.91 96.94 MIR181B2-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 12758.00 87.56 14.98 87.9 MIR10B-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 178.00 8.40 0.21 100.0 MIR130B-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 967.38 45.65 1.14 63.52 MIR130B-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 866.21 40.88 1.02 46.3 MIR130B-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 88484.00 67.79 103.88 100.0 MIR199A1-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 26.00 72.22 0.03 100.0 MIR487B-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 951.24 54.48 1.12 56.15 MIR93-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 710.13 40.67 0.83 51.5 MIR93-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 417.00 72.27 0.49 88.35 MIR532-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 72.00 86.75 0.08 100.0 MIR15B-201 miRNA smooth muscle cell (In vitro differentiated cells)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 146.00 41.60 0.17 100.0 MIR542-201 miRNA smooth muscle cell (In vitro differentiated cells)