ENCFF276PUU

Library Details

Organism: Homo Sapiens
Biosample: mesenchymal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR586TYR
Description: Part of ENCODE experiment ENCSR586TYR.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 5.00 83.33 0.02 100.0 ENST00000597420 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 2058058.00 83.68 9847.80 84.61 CARMN-209 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 12.00 21.43 0.06 100.0 PPFIA1P1-201 processed pseudogene mesenchymal stem cell (In vitro differentiated cells)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 3.00 75.00 0.01 100.0 SNORD114-21-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 6527.00 98.48 31.23 100.0 MIR98-201 miRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 3297.00 95.79 15.78 100.0 MIR15A-201 miRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 1271.00 56.31 6.08 100.0 SNHG21-206 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 3.00 0.30 0.01 75.0 SNORD91A-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 1913.00 47.83 9.15 98.35 MIR486-1-201 miRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 1.00 0.01 0.00 16.67 NOP56-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 298.00 4.06 1.43 100.0 NOP56-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 5049.00 68.77 24.16 100.0 NOP56-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 13.00 0.18 0.06 100.0 NOP56-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 1624.00 3.00 7.77 100.0 RNA5-8SN2-201 rRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 3.00 0.01 0.01 42.86 RNA5-8SN2-201 rRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 7970.61 14.74 38.14 52.55 RNA5-8SN2-201 rRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 1177.00 2.18 5.63 100.0 RNA5-8SN2-201 rRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 3748.00 6.93 17.93 100.0 RNA5-8SN2-201 rRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 5.00 0.01 0.02 62.5 RNA5-8SN2-201 rRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 7020.81 12.98 33.59 46.29 RNA5-8SN2-201 rRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 590.00 96.56 2.82 100.0 MIR7974-201 miRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 5041.00 35.28 24.12 100.0 U2.3-201 snRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 15.00 0.10 0.07 100.0 U2.3-201 snRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 2.00 0.01 0.01 100.0 U2.3-201 snRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 1281.00 30.53 6.13 100.0 U2.6-201 snRNA mesenchymal stem cell (In vitro differentiated cells)