ENCFF276PUU

Library Details

Organism: Homo Sapiens
Biosample: mesenchymal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR586TYR
Description: Part of ENCODE experiment ENCSR586TYR.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 6.00 60.00 0.03 100.0 ENST00000582320 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 3.00 30.00 0.01 100.0 ENST00000582320 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000582320.4 ENST00000582320.4_575_600_+ 575–600 1.00 10.00 0.00 100.0 ENST00000582320 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 116.00 5.43 0.56 100.0 RPL17-214 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000582588.1 ENST00000582588.1_258_318_+ 258–318 348.23 16.30 1.67 49.75 RPL17-214 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000582588.1 ENST00000582588.1_258_320_+ 258–320 402.42 18.84 1.93 54.38 RPL17-214 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000583861.1 ENST00000583861.1_27_62_+ 27–62 2972.00 5.95 14.22 100.0 SNORD43-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000583861.1 ENST00000583861.1_1_62_+ 1–62 37374.00 74.84 178.83 99.93 SNORD43-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000583861.1 ENST00000583861.1_12_62_+ 12–62 1303.00 2.61 6.23 100.0 SNORD43-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000584249.1 ENST00000584249.1_60_79_+ 60–79 1492.00 86.79 7.14 100.0 MIR151B-201 miRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000584923.1 ENST00000584923.1_153_216_+ 153–216 2.00 0.03 0.01 100.0 SNORD3A-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000585881.5 ENST00000585881.5_140_162_+ 140–162 27023.00 64.20 129.30 100.0 NSRP1-214 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000585881.5 ENST00000585881.5_104_126_+ 104–126 10815.00 25.69 51.75 88.11 NSRP1-214 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000587762.2 ENST00000587762.2_6462_6481_+ 6462–6481 30191.00 51.87 144.46 96.28 MIR23AHG-201 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 11014.00 18.92 52.70 82.6 MIR23AHG-201 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000587762.2 ENST00000587762.2_6619_6638_+ 6619–6638 5815.00 9.99 27.82 83.24 MIR23AHG-201 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000587762.2 ENST00000587762.2_6619_6641_+ 6619–6641 2500.00 4.30 11.96 59.95 MIR23AHG-201 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000591345.5 ENST00000591345.5_1414_1429_+ 1414–1429 30.00 32.61 0.14 100.0 ODAD3-204 nonsense mediated decay mesenchymal stem cell (In vitro differentiated cells)
ENST00000592790.1 ENST00000592790.1_3381_3401_+ 3381–3401 27562.00 2.38 131.88 100.0 VMP1-217 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000592790.1 ENST00000592790.1_3343_3402_+ 3343–3402 35.00 0.00 0.17 100.0 VMP1-217 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000592790.1 ENST00000592790.1_3343_3366_+ 3343–3366 879911.00 76.03 4210.37 79.62 VMP1-217 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000595794.5 ENST00000595794.5_236_279_+ 236–279 1812.00 30.65 8.67 100.0 C19orf48P-203 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000595794.5 ENST00000595794.5_236_318_+ 236–318 72.32 1.22 0.35 89.28 C19orf48P-203 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 31.13 0.53 0.15 34.59 C19orf48P-203 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 1060.00 17.93 5.07 100.0 C19orf48P-203 retained intron mesenchymal stem cell (In vitro differentiated cells)