ENCFF276PUU

Library Details

Organism: Homo Sapiens
Biosample: mesenchymal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR586TYR
Description: Part of ENCODE experiment ENCSR586TYR.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 893.00 1.75 4.27 83.85 ENST00000619323 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 49666.00 97.43 237.65 99.51 ENST00000619323 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 388.00 42.40 1.86 100.0 SCARNA4-202 scaRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 2552.00 75.48 12.21 100.0 ENST00000630615 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 99.00 52.94 0.47 100.0 DMRT2-209 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 41.00 21.93 0.20 100.0 DMRT2-209 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 783.00 83.12 3.75 100.0 SNORD98-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 4.00 0.42 0.02 100.0 SNORD98-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 66611.78 26.59 318.74 27.87 MIR106AHG-201 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 25.96 0.01 0.12 38.18 MIR106AHG-201 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 13.00 0.01 0.06 100.0 MIR106AHG-201 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 42.60 0.02 0.20 62.65 MIR106AHG-201 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 2.00 0.09 0.01 66.67 SNHG14-224 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 165.00 7.09 0.79 100.0 SNHG14-224 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 42.00 1.80 0.20 95.45 SNHG14-224 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 10.00 0.43 0.05 23.81 SNHG14-224 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 1056.07 22.10 5.05 69.21 5S_rRNA.20-201 rRNA pseudogene mesenchymal stem cell (In vitro differentiated cells)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 9.00 1.15 0.04 100.0 HSPA9-211 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 16.00 2.04 0.08 76.19 HSPA9-211 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 76381.00 82.18 365.48 100.0 DNM3OS-205 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 113.00 0.05 0.54 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 80.00 0.03 0.38 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 1365.00 0.57 6.53 97.99 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 3884.00 1.61 18.58 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 36.00 0.01 0.17 100.0 GAS5-230 retained intron mesenchymal stem cell (In vitro differentiated cells)