ENCFF274FTM

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR332RHR
Description: Part of ENCODE experiment ENCSR332RHR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 10395.92 56.36 40.94 62.37 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 208.00 1.13 0.82 94.12 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 6221.37 33.73 24.50 37.51 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 575193.00 97.77 2264.95 99.83 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 855.00 26.99 3.37 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 8609.00 38.73 33.90 65.05 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 68.00 0.01 0.27 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 159.00 0.02 0.63 67.66 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 2717.00 58.19 10.70 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 50.00 0.66 0.20 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 588772.00 99.20 2318.42 99.87 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 255.00 0.72 1.00 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 26305.00 74.55 103.58 90.72 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 382.00 62.62 1.50 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 395.00 8.16 1.56 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 394.00 24.67 1.55 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 68673.00 98.08 270.42 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 3623.00 97.42 14.27 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 6568.00 24.62 25.86 93.35 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 150.00 0.56 0.59 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 11.00 0.00 0.04 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 1638.00 21.58 6.45 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 94.00 0.36 0.37 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 224.00 11.07 0.88 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 259.00 12.80 1.02 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA prostate gland (Tissue)