ENCFF274FTM

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR332RHR
Description: Part of ENCODE experiment ENCSR332RHR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 755.00 18.41 2.97 88.93 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 203.00 0.01 0.80 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 5491.00 59.17 21.62 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 5.00 0.74 0.02 23.81 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 16.00 2.35 0.06 76.19 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 239.00 3.21 0.94 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 29435.00 96.86 115.91 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 23.00 14.02 0.09 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 2737.00 78.33 10.78 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 15.00 0.01 0.06 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 51258.00 48.96 201.84 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 33.00 0.03 0.13 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 2197.00 2.10 8.65 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 145.00 0.14 0.57 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 4.00 0.00 0.02 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 879.00 0.03 3.46 96.7 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 2942.00 0.12 11.58 61.79 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 2929.00 0.12 11.53 73.8 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 11737.00 46.31 46.22 80.09 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 5617.00 98.46 22.12 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 3010.00 65.45 11.85 92.79 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 395.00 94.95 1.56 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 1.00 0.00 0.00 3.33 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 29.00 0.04 0.11 96.67 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA prostate gland (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 53520.00 74.39 210.75 97.9 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA prostate gland (Tissue)