ENCFF274FTM

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR332RHR
Description: Part of ENCODE experiment ENCSR332RHR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 82.00 0.05 0.32 100.0 MIR17HG-214 lncRNA prostate gland (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 137.00 0.09 0.54 100.0 MIR17HG-214 lncRNA prostate gland (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 4292.00 6.09 16.90 100.0 SNHG32-223 lncRNA prostate gland (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 453.00 0.64 1.78 100.0 SNHG32-223 lncRNA prostate gland (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 15.00 0.02 0.06 100.0 SNHG32-223 lncRNA prostate gland (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 1712.00 2.43 6.74 75.85 SNHG32-223 lncRNA prostate gland (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 62540.00 88.75 246.27 100.0 SNHG32-223 lncRNA prostate gland (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 9085.00 80.67 35.77 99.03 SNHG32-227 lncRNA prostate gland (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 1231.00 10.93 4.85 100.0 SNHG32-227 lncRNA prostate gland (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 20.00 0.18 0.08 100.0 SNHG32-227 lncRNA prostate gland (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 2.00 0.02 0.01 100.0 SNHG32-227 lncRNA prostate gland (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 1309.00 88.15 5.15 100.0 B4GALT1-203 nonsense mediated decay prostate gland (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 550.00 5.34 2.17 100.0 ENST00000722183 lncRNA prostate gland (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 1026.00 9.96 4.04 85.36 ENST00000722183 lncRNA prostate gland (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 207.00 2.01 0.82 100.0 ENST00000722183 lncRNA prostate gland (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 43.00 44.33 0.17 100.0 MIR34BHG-202 lncRNA prostate gland (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 7463.00 81.88 29.39 85.75 THBS3-AS1-228 lncRNA prostate gland (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 2947.00 47.83 11.60 100.0 MIR200CHG-202 lncRNA prostate gland (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 1242.00 20.16 4.89 100.0 MIR200CHG-202 lncRNA prostate gland (Tissue)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 231.00 2.80 0.91 100.0 SNHG16-266 lncRNA prostate gland (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 3485.00 42.18 13.72 100.0 SNHG16-266 lncRNA prostate gland (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 289.00 3.50 1.14 100.0 SNHG16-266 lncRNA prostate gland (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 685.00 8.29 2.70 100.0 SNHG16-266 lncRNA prostate gland (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 15.00 71.43 0.06 100.0 MEG8-261 lncRNA prostate gland (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 171.00 28.74 0.67 100.0 NR2F2-AS1-327 lncRNA prostate gland (Tissue)