ENCFF274FTM

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR332RHR
Description: Part of ENCODE experiment ENCSR332RHR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 4.00 100.00 0.02 100.0 MIR376C-201 miRNA prostate gland (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 921.00 65.65 3.63 100.0 SNHG21-206 retained intron prostate gland (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 445.00 90.08 1.75 100.0 SNORD11B-201 snoRNA prostate gland (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 1672.00 49.10 6.58 100.0 SNORD91B-201 snoRNA prostate gland (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 5453.00 25.16 21.47 28.96 SNORD91A-201 snoRNA prostate gland (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 21534.00 48.46 84.79 98.1 MIR486-1-201 miRNA prostate gland (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 17622.00 45.90 69.39 67.64 NOP56-219 retained intron prostate gland (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 200.00 0.52 0.79 100.0 NOP56-219 retained intron prostate gland (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 1032.00 2.69 4.06 100.0 NOP56-219 retained intron prostate gland (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 5496.00 14.32 21.64 63.49 NOP56-219 retained intron prostate gland (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 177.00 0.54 0.70 45.74 RNA5-8SN2-201 rRNA prostate gland (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 9778.16 29.79 38.50 46.08 RNA5-8SN2-201 rRNA prostate gland (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 153.00 0.47 0.60 100.0 RNA5-8SN2-201 rRNA prostate gland (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 4480.00 13.65 17.64 100.0 RNA5-8SN2-201 rRNA prostate gland (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 38.00 0.12 0.15 100.0 RNA5-8SN2-201 rRNA prostate gland (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 383.00 1.17 1.51 68.39 RNA5-8SN2-201 rRNA prostate gland (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 11397.86 34.72 44.88 53.72 RNA5-8SN2-201 rRNA prostate gland (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 3.00 60.00 0.01 100.0 MIR376A1-201 miRNA prostate gland (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 665.00 4.91 2.62 100.0 U2.3-201 snRNA prostate gland (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 574.80 4.25 2.26 30.03 U2.3-201 snRNA prostate gland (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 83.00 0.61 0.33 100.0 U2.3-201 snRNA prostate gland (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 4.00 0.03 0.02 100.0 U2.3-201 snRNA prostate gland (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 3.00 0.02 0.01 37.5 U2.3-201 snRNA prostate gland (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 12.00 0.09 0.05 15.0 U2.3-201 snRNA prostate gland (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 31.00 0.23 0.12 100.0 U2.3-201 snRNA prostate gland (Tissue)