ENCFF274FTM

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR332RHR
Description: Part of ENCODE experiment ENCSR332RHR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 1308.05 9.66 5.15 68.34 U2.3-201 snRNA prostate gland (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 421.00 3.11 1.66 100.0 U2.3-201 snRNA prostate gland (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 199.00 1.47 0.78 100.0 U2.3-201 snRNA prostate gland (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 410.00 3.03 1.61 100.0 U2.3-201 snRNA prostate gland (Tissue)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 7.82 0.06 0.03 35.56 U2.3-201 snRNA prostate gland (Tissue)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 10.09 0.07 0.04 50.46 U2.3-201 snRNA prostate gland (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 789.00 7.81 3.11 100.0 U2.6-201 snRNA prostate gland (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 84.00 0.17 0.33 14.29 ENST00000619323 lncRNA prostate gland (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 47647.00 96.06 187.62 98.06 ENST00000619323 lncRNA prostate gland (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 613.00 20.41 2.41 100.0 SCARNA4-202 scaRNA prostate gland (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 539.00 58.21 2.12 100.0 ENST00000625572 miRNA prostate gland (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 9784.00 95.73 38.53 100.0 ENST00000628177 snoRNA prostate gland (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 1216.00 81.61 4.79 100.0 ENST00000630615 snoRNA prostate gland (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 203.00 49.03 0.80 100.0 DMRT2-209 protein coding prostate gland (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 11.00 2.66 0.04 100.0 DMRT2-209 protein coding prostate gland (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 2023.00 65.34 7.97 100.0 SNORD98-201 snoRNA prostate gland (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 327.00 10.56 1.29 100.0 SNORD98-201 snoRNA prostate gland (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 112376.44 75.72 442.51 78.45 MIR106AHG-201 lncRNA prostate gland (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 177.43 0.12 0.70 41.55 MIR106AHG-201 lncRNA prostate gland (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 34.00 0.02 0.13 100.0 MIR106AHG-201 lncRNA prostate gland (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 230.04 0.16 0.91 53.87 MIR106AHG-201 lncRNA prostate gland (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 784.00 72.26 3.09 100.0 MEG8-222 lncRNA prostate gland (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 108.00 9.95 0.43 100.0 MEG8-222 lncRNA prostate gland (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 11291.00 22.56 44.46 98.11 SNHG14-224 lncRNA prostate gland (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 14812.00 29.59 58.33 92.92 SNHG14-224 lncRNA prostate gland (Tissue)