ENCFF274FTM

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR332RHR
Description: Part of ENCODE experiment ENCSR332RHR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 2317.00 19.73 9.12 96.3 MIR23AHG-201 lncRNA prostate gland (Tissue)
ENST00000587762.2 ENST00000587762.2_6462_6481_+ 6462–6481 1264.00 10.76 4.98 76.7 MIR23AHG-201 lncRNA prostate gland (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6638_+ 6619–6638 3964.00 33.76 15.61 92.34 MIR23AHG-201 lncRNA prostate gland (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6641_+ 6619–6641 1822.00 15.52 7.17 79.91 MIR23AHG-201 lncRNA prostate gland (Tissue)
ENST00000591345.5 ENST00000591345.5_1414_1429_+ 1414–1429 6.00 6.06 0.02 100.0 ODAD3-204 nonsense mediated decay prostate gland (Tissue)
ENST00000592790.1 ENST00000592790.1_3381_3401_+ 3381–3401 865.00 1.66 3.41 100.0 VMP1-217 retained intron prostate gland (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3402_+ 3343–3402 126.00 0.24 0.50 100.0 VMP1-217 retained intron prostate gland (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3366_+ 3343–3366 32579.00 62.55 128.29 69.94 VMP1-217 retained intron prostate gland (Tissue)
ENST00000595794.5 ENST00000595794.5_236_279_+ 236–279 3338.00 0.14 13.14 100.0 C19orf48P-203 retained intron prostate gland (Tissue)
ENST00000595794.5 ENST00000595794.5_236_318_+ 236–318 1843480.59 75.31 7259.11 79.52 C19orf48P-203 retained intron prostate gland (Tissue)
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 493599.94 20.17 1943.66 20.5 C19orf48P-203 retained intron prostate gland (Tissue)
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 16031.00 0.65 63.13 90.67 C19orf48P-203 retained intron prostate gland (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 289.00 0.01 1.14 100.0 C19orf48P-203 retained intron prostate gland (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 34.00 0.00 0.13 100.0 C19orf48P-203 retained intron prostate gland (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 46.00 5.53 0.18 100.0 RPS11-206 retained intron prostate gland (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 633.00 76.08 2.49 100.0 RPS11-206 retained intron prostate gland (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 5391858.00 74.81 21231.64 76.27 CARMN-209 lncRNA prostate gland (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 295.00 31.15 1.16 100.0 ENST00000602478 lncRNA prostate gland (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 621.00 60.59 2.45 100.0 PPFIA1P1-201 processed pseudogene prostate gland (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 377.00 21.89 1.48 100.0 SNORD114-21-201 snoRNA prostate gland (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 1032.00 59.93 4.06 100.0 SNORD114-21-201 snoRNA prostate gland (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 138.00 43.53 0.54 100.0 SNORD115-40-201 snoRNA prostate gland (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 11090.00 97.77 43.67 100.0 MIR98-201 miRNA prostate gland (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 721.00 92.55 2.84 100.0 SNORD113-5-201 snoRNA prostate gland (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 132.00 83.54 0.52 100.0 MIR15A-201 miRNA prostate gland (Tissue)