ENCFF274FTM

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR332RHR
Description: Part of ENCODE experiment ENCSR332RHR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 37.00 1.83 0.15 8.85 MIR142HG-201 lncRNA prostate gland (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 60757.00 10.47 239.24 92.17 RPL23A-208 retained intron prostate gland (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 160.45 0.03 0.63 67.14 RPL23A-208 retained intron prostate gland (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 74.18 0.01 0.29 41.67 RPL23A-208 retained intron prostate gland (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 515918.00 88.94 2031.54 93.0 RPL23A-208 retained intron prostate gland (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 88.00 3.24 0.35 100.0 MIR133A1HG-202 lncRNA prostate gland (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 4149.00 6.77 16.34 74.22 RPL17-211 retained intron prostate gland (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 13847.00 22.59 54.53 68.65 RPL17-211 retained intron prostate gland (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 469.00 0.77 1.85 100.0 RPL17-211 retained intron prostate gland (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 31663.00 51.65 124.68 93.23 RPL17-211 retained intron prostate gland (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 8034.00 13.10 31.64 91.89 RPL17-211 retained intron prostate gland (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 27.00 24.11 0.11 32.93 ENST00000582320 lncRNA prostate gland (Tissue)
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 5.00 4.46 0.02 100.0 ENST00000582320 lncRNA prostate gland (Tissue)
ENST00000582320.4 ENST00000582320.4_575_600_+ 575–600 5.00 4.46 0.02 100.0 ENST00000582320 lncRNA prostate gland (Tissue)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 1246.00 8.44 4.91 100.0 RPL17-214 retained intron prostate gland (Tissue)
ENST00000582588.1 ENST00000582588.1_258_318_+ 258–318 6830.51 46.28 26.90 59.19 RPL17-214 retained intron prostate gland (Tissue)
ENST00000582588.1 ENST00000582588.1_258_320_+ 258–320 5003.13 33.90 19.70 40.45 RPL17-214 retained intron prostate gland (Tissue)
ENST00000583861.1 ENST00000583861.1_1_62_+ 1–62 297840.00 98.61 1172.81 99.95 SNORD43-201 snoRNA prostate gland (Tissue)
ENST00000583861.1 ENST00000583861.1_12_62_+ 12–62 63.00 0.02 0.25 100.0 SNORD43-201 snoRNA prostate gland (Tissue)
ENST00000584249.1 ENST00000584249.1_60_79_+ 60–79 100.00 34.36 0.39 100.0 MIR151B-201 miRNA prostate gland (Tissue)
ENST00000584923.1 ENST00000584923.1_153_216_+ 153–216 93.00 3.09 0.37 100.0 SNORD3A-201 snoRNA prostate gland (Tissue)
ENST00000585078.1 ENST00000585078.1_1_83_+ 1–83 1541.00 60.76 6.07 100.0 SNORD92-201 snoRNA prostate gland (Tissue)
ENST00000585881.5 ENST00000585881.5_140_162_+ 140–162 2222.00 41.29 8.75 100.0 NSRP1-214 protein coding prostate gland (Tissue)
ENST00000585881.5 ENST00000585881.5_104_126_+ 104–126 2256.00 41.93 8.88 85.52 NSRP1-214 protein coding prostate gland (Tissue)
ENST00000587762.2 ENST00000587762.2_6337_6420_+ 6337–6420 683.00 5.82 2.69 100.0 MIR23AHG-201 lncRNA prostate gland (Tissue)