ENCFF274FTM

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR332RHR
Description: Part of ENCODE experiment ENCSR332RHR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 1941.00 32.97 7.64 100.0 RPL4-207 retained intron prostate gland (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 1207.00 20.50 4.75 100.0 RPL4-207 retained intron prostate gland (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 54060.00 75.46 212.87 95.92 ENST00000565336 lncRNA prostate gland (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 7042.00 9.83 27.73 79.14 ENST00000565336 lncRNA prostate gland (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 5830.00 0.83 22.96 100.0 RBMX-210 retained intron prostate gland (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 695.00 0.10 2.74 100.0 RBMX-210 retained intron prostate gland (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 7246.00 1.03 28.53 100.0 RBMX-210 retained intron prostate gland (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 374964.00 53.29 1476.50 55.25 RBMX-210 retained intron prostate gland (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 183.00 11.41 0.72 100.0 RPL4-214 retained intron prostate gland (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 679.00 42.33 2.67 100.0 RPL4-214 retained intron prostate gland (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 6119.31 17.07 24.10 26.58 POLG-DT-202 lncRNA prostate gland (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 17263.31 48.16 67.98 79.91 POLG-DT-202 lncRNA prostate gland (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 351.00 0.98 1.38 100.0 POLG-DT-202 lncRNA prostate gland (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 1047.00 1.75 4.12 100.0 ENST00000570843 lncRNA prostate gland (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 4198.00 82.04 16.53 100.0 MIR497HG-207 lncRNA prostate gland (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 24664.00 97.40 97.12 98.68 MIR22HG-212 lncRNA prostate gland (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 551.00 2.48 2.17 73.47 SNORD53B-201 snoRNA prostate gland (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 20429.00 91.98 80.44 96.3 SNORD53B-201 snoRNA prostate gland (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 199.00 0.90 0.78 26.53 SNORD53B-201 snoRNA prostate gland (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 108.00 28.05 0.43 100.0 ENST00000578036 lncRNA prostate gland (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 345.00 74.84 1.36 100.0 RPL23A-207 protein coding prostate gland (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 598.00 88.07 2.35 100.0 MIR744-201 miRNA prostate gland (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 127.00 61.95 0.50 100.0 MIR378C-201 miRNA prostate gland (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 1747.00 86.36 6.88 90.75 MIR142HG-201 lncRNA prostate gland (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 1.00 0.05 0.00 100.0 MIR142HG-201 lncRNA prostate gland (Tissue)