ENCFF274FTM

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR332RHR
Description: Part of ENCODE experiment ENCSR332RHR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 970.00 0.26 3.82 100.0 SNORD71-201 snoRNA prostate gland (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 409.00 0.11 1.61 100.0 SNORD71-201 snoRNA prostate gland (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 372561.00 98.90 1467.04 99.9 SNORD71-201 snoRNA prostate gland (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 10961.00 89.47 43.16 95.74 MIR194-2HG-201 lncRNA prostate gland (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 1201.00 9.80 4.73 36.71 MIR194-2HG-201 lncRNA prostate gland (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 2.00 66.67 0.01 100.0 RPS7P15-201 processed pseudogene prostate gland (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 1169.00 30.34 4.60 88.49 SNORD62B-201 snoRNA prostate gland (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 94.00 2.44 0.37 100.0 SNORD62B-201 snoRNA prostate gland (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 335.00 8.69 1.32 100.0 SNORD62B-201 snoRNA prostate gland (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 15.00 0.39 0.06 100.0 SNORD62B-201 snoRNA prostate gland (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 483.00 12.54 1.90 100.0 SNORD62B-201 snoRNA prostate gland (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 37.00 97.37 0.15 100.0 MRPL32-203 nonsense mediated decay prostate gland (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 24.00 68.57 0.09 100.0 ENST00000436739 lncRNA prostate gland (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 140.00 8.52 0.55 100.0 TMEM107-204 protein coding prostate gland (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 884.00 53.77 3.48 88.58 TMEM107-204 protein coding prostate gland (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 6.00 0.36 0.02 37.5 TMEM107-204 protein coding prostate gland (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1267_+ 1182–1267 81.00 4.93 0.32 100.0 TMEM107-204 protein coding prostate gland (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 1.00 0.06 0.00 100.0 TMEM107-204 protein coding prostate gland (Tissue)
ENST00000448136.6 ENST00000448136.6_1026_1098_+ 1026–1098 87.00 7.05 0.34 100.0 SNHG16-201 lncRNA prostate gland (Tissue)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 654.00 53.00 2.58 98.35 SNHG16-201 lncRNA prostate gland (Tissue)
ENST00000453082.5 ENST00000453082.5_267_347_+ 267–347 13.00 8.44 0.05 100.0 SNHG14-207 lncRNA prostate gland (Tissue)
ENST00000458770.1 ENST00000458770.1_7_74_+ 7–74 21532.00 70.75 84.79 94.11 SNORD105B-201 snoRNA prostate gland (Tissue)
ENST00000458838.1 ENST00000458838.1_8_75_+ 8–75 164.00 19.88 0.65 36.36 SNORD121B-201 snoRNA prostate gland (Tissue)
ENST00000458892.1 ENST00000458892.1_5_39_+ 5–39 80.00 0.10 0.32 100.0 SNORD127-201 snoRNA prostate gland (Tissue)
ENST00000458892.1 ENST00000458892.1_5_80_+ 5–80 77556.00 97.36 305.39 99.22 SNORD127-201 snoRNA prostate gland (Tissue)