ENCFF274FTM

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR332RHR
Description: Part of ENCODE experiment ENCSR332RHR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 14011.00 96.36 55.17 100.0 SNORD42B-201 snoRNA prostate gland (Tissue)
ENST00000459254.1 ENST00000459254.1_69_90_+ 69–90 505.00 10.27 1.99 100.0 RNY4P25-201 misc RNA prostate gland (Tissue)
ENST00000459386.1 ENST00000459386.1_9_73_+ 9–73 164.00 63.57 0.65 100.0 SNORD121A-201 snoRNA prostate gland (Tissue)
ENST00000459475.1 ENST00000459475.1_4_75_+ 4–75 296.00 13.07 1.17 70.64 SNORD126-201 snoRNA prostate gland (Tissue)
ENST00000459475.1 ENST00000459475.1_4_72_+ 4–72 1822.00 80.48 7.17 97.28 SNORD126-201 snoRNA prostate gland (Tissue)
ENST00000459577.1 ENST00000459577.1_12_91_+ 12–91 7027.00 90.92 27.67 95.98 SNORD124-201 snoRNA prostate gland (Tissue)
ENST00000461448.6 ENST00000461448.6_522_587_+ 522–587 190.00 15.30 0.75 100.0 SNHG12-201 retained intron prostate gland (Tissue)
ENST00000467105.1 ENST00000467105.1_582_665_+ 582–665 1021.00 18.82 4.02 100.0 RPL3-212 retained intron prostate gland (Tissue)
ENST00000467105.1 ENST00000467105.1_581_668_+ 581–668 548.00 10.10 2.16 68.07 RPL3-212 retained intron prostate gland (Tissue)
ENST00000469129.1 ENST00000469129.1_822_842_+ 822–842 5407.00 96.71 21.29 100.0 SMC1A-204 retained intron prostate gland (Tissue)
ENST00000471759.5 ENST00000471759.5_372_449_+ 372–449 41582.00 92.04 163.74 99.31 RABGGTB-208 protein coding CDS not defined prostate gland (Tissue)
ENST00000481456.1 ENST00000481456.1_862_898_+ 862–898 883.00 17.11 3.48 100.0 DDX39B-219 retained intron prostate gland (Tissue)
ENST00000481456.1 ENST00000481456.1_847_901_+ 847–901 161.00 3.12 0.63 100.0 DDX39B-219 retained intron prostate gland (Tissue)
ENST00000481456.1 ENST00000481456.1_825_898_+ 825–898 2413.00 46.75 9.50 77.76 DDX39B-219 retained intron prostate gland (Tissue)
ENST00000484599.1 ENST00000484599.1_580_645_+ 580–645 1457.00 70.22 5.74 100.0 RPS8-206 protein coding CDS not defined prostate gland (Tissue)
ENST00000484610.5 ENST00000484610.5_361_433_+ 361–433 210364.00 95.55 828.35 99.56 RPL13-207 retained intron prostate gland (Tissue)
ENST00000484610.5 ENST00000484610.5_392_433_+ 392–433 4536.00 2.06 17.86 100.0 RPL13-207 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 150284.00 63.46 591.78 99.24 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 1152.00 0.49 4.54 100.0 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 2502.00 1.06 9.85 48.59 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 111.00 0.05 0.44 100.0 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 25899.00 10.94 101.98 69.25 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 248.00 0.10 0.98 47.33 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 1692.00 0.71 6.66 50.39 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 439.00 0.19 1.73 52.64 EIF4A2-219 retained intron prostate gland (Tissue)