Precursor detail

TRNA-TRANSCRIPT-CHR17-39154491

Linked gene tRNA-gene-chr17-39154491 • Homo Sapiens

3 sncRNAs

Precursor snapshot

Transcript name: Not available
Transcript ID: TRNA-TRANSCRIPT-CHR17-39154491
Precursor type: Cys tRNA

Chromosome: chr17
Genomic start: 39154491
Genomic end: 39154562
Strand: Not available

Precursor Annotation

Gene and transcript context

Gene context

Gene name: tRNA-gene-chr17-39154491
Gene ID: TRNA-GENE-CHR17-39154491
Gene type: Cys_tRNA

Transcript metrics

Total sncRNAs: 3
Transcript length: 72

Expression table for sncRNAs derived from this precursor

Showing 1–3 of 3 results |

sncRNA Name	Position in precursor	Expression (sum)	Expression fraction	Expression (CPM sum)	Prominence	Biosamples
tRNA-transcript-chr17-39154491_1_34_+	1–34	92437.00	26.14	2.38	51.51	GM12878 (Cell line) K562 (Cell line) parietal lobe (Tissue) temporal lobe (Tissue) spinal cord (Tissue) tongue (Tissue) occipital lobe (Tissue) diencephalon (Tissue) heart (Tissue) skin of body (Tissue) skeletal muscle tissue (Tissue) uterus (Tissue) metanephros (Tissue) lung (Tissue) cerebellum (Tissue) frontal cortex (Tissue) thyroid gland (Tissue) urinary bladder (Tissue) liver (Tissue) GM23338 (Cell line) Karpas-422 (Cell line) spleen (Tissue) A375 (Cell line) GM23248 (Cell line) transverse colon (Tissue) ovary (Tissue) esophagus muscularis mucosa (Tissue) right lobe of liver (Tissue) gastroesophageal sphincter (Tissue) upper lobe of left lung (Tissue) neural progenitor cell (In vitro differentiated cells) testis (Tissue) smooth muscle cell (In vitro differentiated cells) mesenchymal stem cell (In vitro differentiated cells) stomach (Tissue) prostate gland (Tissue) OCI-LY7 (Cell line) vagina (Tissue) trophoblast cell (In vitro differentiated cells) esophagus squamous epithelium (Tissue) Peyer's patch (Tissue) mesendoderm (In vitro differentiated cells) neuronal stem cell (In vitro differentiated cells) adrenal gland (Tissue) hepatocyte (In vitro differentiated cells) HT-29 (Cell line) sigmoid colon (Tissue) tibial nerve (Tissue) subcutaneous adipose tissue (Tissue) omental fat pad (Tissue)
tRNA-transcript-chr17-39154491_1_32_+	1–32	87031.00	24.61	2.23	48.49	GM12878 (Cell line) K562 (Cell line) parietal lobe (Tissue) temporal lobe (Tissue) spinal cord (Tissue) tongue (Tissue) occipital lobe (Tissue) diencephalon (Tissue) heart (Tissue) skin of body (Tissue) skeletal muscle tissue (Tissue) uterus (Tissue) metanephros (Tissue) lung (Tissue) cerebellum (Tissue) frontal cortex (Tissue) thyroid gland (Tissue) urinary bladder (Tissue) liver (Tissue) GM23338 (Cell line) Karpas-422 (Cell line) prostate gland (Tissue) GM23248 (Cell line) transverse colon (Tissue) ovary (Tissue) esophagus muscularis mucosa (Tissue) right lobe of liver (Tissue) gastroesophageal sphincter (Tissue) upper lobe of left lung (Tissue) neural progenitor cell (In vitro differentiated cells) testis (Tissue) smooth muscle cell (In vitro differentiated cells) mesenchymal stem cell (In vitro differentiated cells) stomach (Tissue) OCI-LY7 (Cell line) vagina (Tissue) trophoblast cell (In vitro differentiated cells) spleen (Tissue) esophagus squamous epithelium (Tissue) Peyer's patch (Tissue) mesendoderm (In vitro differentiated cells) neuronal stem cell (In vitro differentiated cells) adrenal gland (Tissue) hepatocyte (In vitro differentiated cells) HT-29 (Cell line) sigmoid colon (Tissue) subcutaneous adipose tissue (Tissue) omental fat pad (Tissue) body of pancreas (Tissue)
tRNA-transcript-chr17-39154491_1_13_+	1–13	40080.00	11.33	1.03	100.0	GM12878 (Cell line) K562 (Cell line) parietal lobe (Tissue) temporal lobe (Tissue) spinal cord (Tissue) tongue (Tissue) occipital lobe (Tissue) diencephalon (Tissue) heart (Tissue) skin of body (Tissue) skeletal muscle tissue (Tissue) uterus (Tissue) metanephros (Tissue) lung (Tissue) cerebellum (Tissue) frontal cortex (Tissue) thyroid gland (Tissue) urinary bladder (Tissue) liver (Tissue) GM23338 (Cell line) Karpas-422 (Cell line) A375 (Cell line) GM23248 (Cell line) upper lobe of left lung (Tissue) neural progenitor cell (In vitro differentiated cells) smooth muscle cell (In vitro differentiated cells) mesenchymal stem cell (In vitro differentiated cells) OCI-LY7 (Cell line) trophoblast cell (In vitro differentiated cells) Peyer's patch (Tissue) mesendoderm (In vitro differentiated cells) neuronal stem cell (In vitro differentiated cells) hepatocyte (In vitro differentiated cells) HT-29 (Cell line) adrenal gland (Tissue) body of pancreas (Tissue)