ENCFF261XRS

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR133GQJ
Description: Part of ENCODE experiment ENCSR133GQJ. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 46.00 9.62 0.22 25.99 TMC5-202 protein coding stomach (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 36.00 59.02 0.18 100.0 ZMYM2-203 protein coding stomach (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 50.00 3.79 0.24 100.0 RNVU1-7-201 snRNA stomach (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 372.00 53.60 1.81 100.0 Y_RNA.389-201 misc RNA stomach (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 832.00 1.47 4.05 100.0 SNORD101-201 snoRNA stomach (Tissue)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 13.00 0.02 0.06 3.64 SNORD101-201 snoRNA stomach (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 53491.00 94.41 260.63 99.88 SNORD101-201 snoRNA stomach (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 123.00 0.22 0.60 100.0 SNORD101-201 snoRNA stomach (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 38946.00 98.05 189.76 100.0 SNORD37-201 snoRNA stomach (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 73487.00 97.62 358.05 99.99 SNORD59A-201 snoRNA stomach (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 207.00 42.51 1.01 100.0 SNORA7B-201 snoRNA stomach (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 76.00 13.40 0.37 100.0 Y_RNA.555-201 misc RNA stomach (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 12869.00 94.65 62.70 95.72 MIR25-201 miRNA stomach (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 19491.00 91.67 94.97 97.78 MIR99B-201 miRNA stomach (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 14115.00 44.30 68.77 82.56 MIR23B-201 miRNA stomach (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 16752.00 52.58 81.62 78.66 MIR23B-201 miRNA stomach (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 879.00 71.46 4.28 100.0 MIR203A-201 miRNA stomach (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 7448.00 86.40 36.29 90.65 MIR199B-201 miRNA stomach (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 142.00 1.65 0.69 100.0 MIR199B-201 miRNA stomach (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 4979.00 95.92 24.26 100.0 MIR30B-201 miRNA stomach (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 1299.00 96.65 6.33 100.0 MIR181D-201 miRNA stomach (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 131.00 89.73 0.64 100.0 MIR215-201 miRNA stomach (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 525.00 0.73 2.56 100.0 MIR181A2-201 miRNA stomach (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 63006.00 98.41 306.99 99.14 MIR191-201 miRNA stomach (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 98.00 84.48 0.48 88.29 MIR149-201 miRNA stomach (Tissue)