ENCFF261XRS

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR133GQJ
Description: Part of ENCODE experiment ENCSR133GQJ. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 32796.00 87.60 159.79 100.0 SNORD38A-201 snoRNA stomach (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 5718.00 88.86 27.86 96.93 SNORD114-20-201 snoRNA stomach (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 719.00 25.75 3.50 89.21 7SK.1-201 misc RNA stomach (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 346.00 12.39 1.69 65.65 7SK.1-201 misc RNA stomach (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 332.00 11.89 1.62 79.24 7SK.1-201 misc RNA stomach (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 19.00 0.68 0.09 21.84 7SK.1-201 misc RNA stomach (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 14.00 0.50 0.07 100.0 7SK.1-201 misc RNA stomach (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 783.00 44.19 3.82 100.0 RNA5SP77-201 rRNA pseudogene stomach (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 6737.00 37.90 32.82 97.03 SNORD114-22-201 snoRNA stomach (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 10524.00 59.20 51.28 100.0 SNORD114-22-201 snoRNA stomach (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 7133.00 83.24 34.75 100.0 SNORD6-201 snoRNA stomach (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 279.00 3.26 1.36 100.0 SNORD6-201 snoRNA stomach (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 14755.00 53.71 71.89 97.55 SNORD82-201 snoRNA stomach (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 655.00 2.38 3.19 100.0 SNORD82-201 snoRNA stomach (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 470.00 1.71 2.29 100.0 SNORD82-201 snoRNA stomach (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 600.00 2.18 2.92 100.0 SNORD82-201 snoRNA stomach (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 2172.00 7.91 10.58 90.92 SNORD82-201 snoRNA stomach (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 1820.72 6.63 8.87 33.17 SNORD82-201 snoRNA stomach (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 3656.30 13.31 17.81 66.61 SNORD82-201 snoRNA stomach (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 26778.00 97.16 130.47 98.41 MIR146B-201 miRNA stomach (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 15789.00 95.62 76.93 100.0 SNHG20-201 lncRNA stomach (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 9.00 1.81 0.04 100.0 ATP5MK-205 protein coding stomach (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 113.00 22.69 0.55 100.0 ATP5MK-205 protein coding stomach (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 15.00 16.13 0.07 100.0 LINC01556-201 lncRNA stomach (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 160.00 50.31 0.78 100.0 ATAD3A-202 protein coding stomach (Tissue)