ENCFF261XRS

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR133GQJ
Description: Part of ENCODE experiment ENCSR133GQJ. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 182.22 3.87 0.89 26.96 RNY1-201 misc RNA stomach (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 16104.63 7.63 78.47 40.64 RNA5SP202-201 rRNA pseudogene stomach (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 2242.62 1.06 10.93 69.35 RNA5SP202-201 rRNA pseudogene stomach (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 335.00 0.16 1.63 100.0 RNA5SP202-201 rRNA pseudogene stomach (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 850.00 0.40 4.14 100.0 RNA5SP202-201 rRNA pseudogene stomach (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 261.00 0.12 1.27 100.0 RNA5SP202-201 rRNA pseudogene stomach (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 1545.87 0.73 7.53 47.17 RNA5SP202-201 rRNA pseudogene stomach (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 424.00 0.20 2.07 100.0 RNA5SP202-201 rRNA pseudogene stomach (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 5519.00 2.62 26.89 100.0 RNA5SP202-201 rRNA pseudogene stomach (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 791.00 0.37 3.85 100.0 RNA5SP202-201 rRNA pseudogene stomach (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 3756.00 59.33 18.30 100.0 SNORD114-9-201 snoRNA stomach (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 1879.00 29.68 9.16 100.0 SNORD114-9-201 snoRNA stomach (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 3430.00 28.53 16.71 100.0 Y_RNA.234-201 misc RNA stomach (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 48.00 4.62 0.23 100.0 RNA5SP141-201 rRNA pseudogene stomach (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 227.00 66.57 1.11 100.0 SNORD114-15-201 snoRNA stomach (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 34.00 18.48 0.17 100.0 ENST00000364722 snoRNA stomach (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 183.00 43.99 0.89 100.0 SNORD113-3-201 snoRNA stomach (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 2398.00 73.54 11.68 100.0 SNORD52-201 snoRNA stomach (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 666.00 12.34 3.24 100.0 SNORD114-3-201 snoRNA stomach (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 4325.00 80.15 21.07 99.98 SNORD114-3-201 snoRNA stomach (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 28.00 0.52 0.14 100.0 SNORD114-3-201 snoRNA stomach (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 28.00 4.58 0.14 100.0 RNA5SP298-201 rRNA pseudogene stomach (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 1156.00 83.41 5.63 100.0 SNORD113-9-201 snoRNA stomach (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 474.00 1.27 2.31 100.0 SNORD38A-201 snoRNA stomach (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 32796.00 87.60 159.79 100.0 SNORD38A-201 snoRNA stomach (Tissue)