ENCFF261XRS

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR133GQJ
Description: Part of ENCODE experiment ENCSR133GQJ. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 5235.00 19.28 25.51 67.66 RNU5A-1-201 snRNA stomach (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 28.00 0.10 0.14 100.0 RNU5A-1-201 snRNA stomach (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 439.99 1.62 2.14 44.85 RNU5A-1-201 snRNA stomach (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 3029.00 11.16 14.76 70.05 RNU5A-1-201 snRNA stomach (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 2547.00 9.38 12.41 59.65 RNU5A-1-201 snRNA stomach (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 3518.00 12.96 17.14 65.21 RNU5A-1-201 snRNA stomach (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 1837.00 90.14 8.95 100.0 SNORD114-14-201 snoRNA stomach (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 1430.00 8.37 6.97 100.0 SNORD104-201 snoRNA stomach (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 68.00 0.40 0.33 100.0 SNORD104-201 snoRNA stomach (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 112890.00 61.58 550.04 74.05 RNA5SP358-201 rRNA pseudogene stomach (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 21.00 1.52 0.10 42.86 RNA5SP145-201 rRNA pseudogene stomach (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 8.00 33.33 0.04 100.0 Y_RNA.105-201 misc RNA stomach (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 12.00 2.41 0.06 100.0 RNY4P9-201 misc RNA stomach (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 3122.00 35.36 15.21 100.0 RNU5B-1-201 snRNA stomach (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 1144.00 12.96 5.57 100.0 RNU5B-1-201 snRNA stomach (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 83.00 0.94 0.40 100.0 RNU5B-1-201 snRNA stomach (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 66.00 4.51 0.32 98.51 RNY4P27-201 misc RNA stomach (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 2.00 0.14 0.01 66.67 RNY4P27-201 misc RNA stomach (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 397.00 17.10 1.93 100.0 Y_RNA.136-201 misc RNA stomach (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 6938.00 95.20 33.80 98.68 SNORD114-25-201 snoRNA stomach (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 1955.00 93.50 9.53 100.0 SNORD113-7-201 snoRNA stomach (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 133.00 36.44 0.65 100.0 Y_RNA.181-201 misc RNA stomach (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 772.81 16.42 3.77 78.94 RNY1-201 misc RNA stomach (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 182.22 3.87 0.89 26.96 RNY1-201 misc RNA stomach (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 317.00 6.73 1.54 100.0 RNY1-201 misc RNA stomach (Tissue)