ENCFF261XRS

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR133GQJ
Description: Part of ENCODE experiment ENCSR133GQJ. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 8154.86 20.65 39.73 55.15 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 1963.18 4.97 9.57 35.62 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 1612.10 4.08 7.85 75.47 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 4972.26 12.59 24.23 71.21 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 50.00 13.51 0.24 100.0 ENST00000756452 lncRNA stomach (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 8061.00 50.58 39.28 100.0 ENST00000760093 lncRNA stomach (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 1529.00 9.59 7.45 100.0 ENST00000760093 lncRNA stomach (Tissue)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 49.00 0.02 0.24 100.0 LINC02806-241 lncRNA stomach (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 9552.00 4.82 46.54 76.56 LINC02806-241 lncRNA stomach (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 208.00 0.11 1.01 100.0 LINC02806-241 lncRNA stomach (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 171930.00 86.84 837.70 95.82 LINC02806-241 lncRNA stomach (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 880.00 92.44 4.29 100.0 EHBP1-AS1-210 lncRNA stomach (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 251.00 8.56 1.22 100.0 ENST00000770398 lncRNA stomach (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 110.00 3.75 0.54 100.0 ENST00000770398 lncRNA stomach (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 1767.00 60.27 8.61 100.0 ENST00000770398 lncRNA stomach (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 284.00 0.34 1.38 100.0 ENST00000771298 lncRNA stomach (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 159.00 0.19 0.77 100.0 ENST00000771298 lncRNA stomach (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 73637.00 86.91 358.78 92.8 ENST00000771298 lncRNA stomach (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 1462.00 1.73 7.12 100.0 ENST00000771298 lncRNA stomach (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 4.00 1.02 0.02 100.0 ENST00000772672 lncRNA stomach (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 416.00 18.46 2.03 100.0 ENST00000773843 lncRNA stomach (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 73954.00 33.65 360.33 86.49 SNHG12-223 lncRNA stomach (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 144841.00 65.91 705.71 99.0 SNHG12-223 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 13831.00 45.14 67.39 100.0 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 211.00 0.69 1.03 69.41 SNHG25-206 lncRNA stomach (Tissue)