ENCFF261XRS

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR133GQJ
Description: Part of ENCODE experiment ENCSR133GQJ. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 7334.00 59.31 35.73 80.9 MIR99AHG-262 lncRNA stomach (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 2213.00 17.90 10.78 100.0 MIR99AHG-262 lncRNA stomach (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 348.00 85.50 1.70 91.1 MIR9-2HG-225 lncRNA stomach (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 878.00 48.48 4.28 100.0 MEG8-233 lncRNA stomach (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 309.00 17.06 1.51 100.0 MEG8-233 lncRNA stomach (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 442.00 35.08 2.15 100.0 MEG8-234 lncRNA stomach (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 173.00 13.73 0.84 100.0 MEG8-234 lncRNA stomach (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 214.00 79.55 1.04 100.0 MEG8-240 lncRNA stomach (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 21.00 28.00 0.10 100.0 SNHG14-306 lncRNA stomach (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 1.00 1.33 0.00 100.0 SNHG14-306 lncRNA stomach (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 180.00 11.06 0.88 100.0 ENST00000666735 lncRNA stomach (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 8.00 0.49 0.04 100.0 ENST00000666735 lncRNA stomach (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 1212.00 81.02 5.91 100.0 MEG8-242 lncRNA stomach (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 254.00 0.44 1.24 100.0 MEG8-244 lncRNA stomach (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 298.00 0.51 1.45 100.0 MEG8-244 lncRNA stomach (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 57026.00 97.72 277.85 99.84 MEG8-244 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 1077.00 0.18 5.25 100.0 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 5.00 0.00 0.02 100.0 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 4362.00 0.74 21.25 98.51 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 1796.08 0.31 8.75 65.53 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 1250.00 0.21 6.09 72.51 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 352493.00 59.96 1717.46 99.6 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 780.00 0.13 3.80 79.19 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 61637.00 10.49 300.32 99.36 SNHG1-248 lncRNA stomach (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 10629.00 1.81 51.79 100.0 SNHG1-248 lncRNA stomach (Tissue)