ENCFF261XRS

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR133GQJ
Description: Part of ENCODE experiment ENCSR133GQJ. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 47.00 0.22 0.23 100.0 ENST00000651540 lncRNA stomach (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 766.00 3.59 3.73 54.68 ENST00000651540 lncRNA stomach (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 20.00 0.09 0.10 100.0 ENST00000651540 lncRNA stomach (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 60.00 0.28 0.29 100.0 ENST00000651540 lncRNA stomach (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 163.00 0.76 0.79 100.0 ENST00000651540 lncRNA stomach (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 2581.00 12.10 12.58 42.78 ENST00000651540 lncRNA stomach (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 528.00 2.48 2.57 100.0 ENST00000651540 lncRNA stomach (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 11549.00 54.14 56.27 88.42 ENST00000651540 lncRNA stomach (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 3247.00 0.64 15.82 100.0 MIRLET7A1HG-203 lncRNA stomach (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 1307.00 93.96 6.37 100.0 MEG8-225 lncRNA stomach (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 2171.00 58.45 10.58 100.0 SNHG29-232 lncRNA stomach (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 720.00 19.39 3.51 100.0 SNHG29-232 lncRNA stomach (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 217.00 5.84 1.06 100.0 SNHG29-232 lncRNA stomach (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 3.00 0.08 0.01 100.0 SNHG29-232 lncRNA stomach (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 7.00 0.19 0.03 100.0 SNHG29-232 lncRNA stomach (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 174.00 5.50 0.85 100.0 SNHG14-234 lncRNA stomach (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 49.00 1.55 0.24 100.0 SNHG14-234 lncRNA stomach (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 594.00 6.06 2.89 100.0 ENST00000655317 lncRNA stomach (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 5974.00 60.96 29.11 92.25 ENST00000655317 lncRNA stomach (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 2737.00 1.43 13.34 92.31 LINC01962-202 lncRNA stomach (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 184864.00 96.75 900.72 100.0 LINC01962-202 lncRNA stomach (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 370.00 0.19 1.80 100.0 LINC01962-202 lncRNA stomach (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 13633.00 96.80 66.42 100.0 MEG8-228 lncRNA stomach (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 1791.00 18.70 8.73 100.0 LIMD1-AS1-204 lncRNA stomach (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 2849.00 29.75 13.88 96.54 LIMD1-AS1-204 lncRNA stomach (Tissue)