ENCFF261XRS

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR133GQJ
Description: Part of ENCODE experiment ENCSR133GQJ. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 12552.00 86.82 61.16 90.88 MIR100-201 miRNA stomach (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 123.00 99.19 0.60 100.0 MIR301A-201 miRNA stomach (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 358.00 4.84 1.74 37.18 MIR130A-201 miRNA stomach (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 7018.00 94.80 34.19 97.66 MIR130A-201 miRNA stomach (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 248659.00 97.94 1211.55 98.56 MIRLET7F2-201 miRNA stomach (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 263.00 79.94 1.28 100.0 MIR652-201 miRNA stomach (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 3206.00 83.40 15.62 100.0 MIR140-201 miRNA stomach (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 23.00 2.29 0.11 100.0 MIR106B-201 miRNA stomach (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 409.00 40.66 1.99 61.23 MIR106B-201 miRNA stomach (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 1320.00 81.13 6.43 100.0 SNORD41-201 snoRNA stomach (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 6291.00 18.19 30.65 100.0 MT-TF-201 Mt tRNA stomach (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 8690.00 25.13 42.34 62.53 MT-TF-201 Mt tRNA stomach (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 479.00 1.38 2.33 15.03 MT-TF-201 Mt tRNA stomach (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 12187.00 57.72 59.38 100.0 MT-TV-201 Mt tRNA stomach (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 1706.00 8.47 8.31 79.72 MT-RNR2-201 Mt rRNA stomach (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 461.00 2.29 2.25 100.0 MT-RNR2-201 Mt rRNA stomach (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 23.00 0.11 0.11 100.0 MT-RNR2-201 Mt rRNA stomach (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 2892.00 14.37 14.09 91.72 MT-RNR2-201 Mt rRNA stomach (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 32.00 0.16 0.16 100.0 MT-RNR2-201 Mt rRNA stomach (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 94.00 0.47 0.46 100.0 MT-RNR2-201 Mt rRNA stomach (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 15.00 0.07 0.07 100.0 MT-RNR2-201 Mt rRNA stomach (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 4399.00 50.81 21.43 97.58 MT-TI-201 Mt tRNA stomach (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 1477.00 17.06 7.20 100.0 MT-TI-201 Mt tRNA stomach (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 78026.00 52.99 380.17 93.61 MT-TQ-201 Mt tRNA stomach (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 20265.37 13.76 98.74 64.24 MT-TQ-201 Mt tRNA stomach (Tissue)