ENCFF242SEA

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR033TKS
Description: Part of ENCODE experiment ENCSR033TKS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 13430.00 24.35 58.30 91.35 SNORD82-201 snoRNA body of pancreas (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 7706.26 13.97 33.45 63.82 SNORD82-201 snoRNA body of pancreas (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 4684.46 8.49 20.33 38.79 SNORD82-201 snoRNA body of pancreas (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 40183.00 94.52 174.43 96.89 MIR146B-201 miRNA body of pancreas (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 139.00 18.94 0.60 100.0 SNHG20-201 lncRNA body of pancreas (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 31.00 9.06 0.13 100.0 ATP5MK-205 protein coding body of pancreas (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 6.00 1.75 0.03 100.0 ATP5MK-205 protein coding body of pancreas (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 69.00 25.56 0.30 100.0 LINC01556-201 lncRNA body of pancreas (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 733.00 55.57 3.18 100.0 ATAD3A-202 protein coding body of pancreas (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 26.00 9.42 0.11 25.24 TMC5-202 protein coding body of pancreas (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 529.00 2.53 2.30 100.0 RNVU1-7-201 snRNA body of pancreas (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 2515.00 25.88 10.92 100.0 SNORD24-201 snoRNA body of pancreas (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 47.00 52.81 0.20 100.0 Y_RNA.389-201 misc RNA body of pancreas (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 2024.00 2.88 8.79 100.0 SNORD101-201 snoRNA body of pancreas (Tissue)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 623.00 0.89 2.70 67.94 SNORD101-201 snoRNA body of pancreas (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 64987.00 92.38 282.10 99.87 SNORD101-201 snoRNA body of pancreas (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 332.00 0.47 1.44 100.0 SNORD101-201 snoRNA body of pancreas (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 68811.00 97.30 298.70 100.0 SNORD37-201 snoRNA body of pancreas (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 305925.00 96.90 1327.96 99.61 SNORD59A-201 snoRNA body of pancreas (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 178.00 25.57 0.77 100.0 SNORA7B-201 snoRNA body of pancreas (Tissue)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 852.00 74.22 3.70 100.0 SNORD14D-201 snoRNA body of pancreas (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 37.00 31.09 0.16 100.0 Y_RNA.555-201 misc RNA body of pancreas (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 13472.00 88.75 58.48 90.65 MIR25-201 miRNA body of pancreas (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 6750.00 89.78 29.30 96.7 MIR99B-201 miRNA body of pancreas (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 1646.00 38.72 7.14 80.29 MIR23B-201 miRNA body of pancreas (Tissue)