ENCFF242SEA

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR033TKS
Description: Part of ENCODE experiment ENCSR033TKS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 2344.00 9.48 10.17 54.5 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 432.00 0.55 1.88 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 682.00 0.17 2.96 64.4 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 4963.00 63.42 21.54 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 456.00 1.72 1.98 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 63007.00 77.40 273.50 99.6 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 15.00 0.03 0.07 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 6552.00 14.83 28.44 69.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 42.00 2.56 0.18 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 173.00 5.55 0.75 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 25.00 0.24 0.11 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 11615.00 70.22 50.42 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 325.00 85.30 1.41 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 49530.00 38.44 215.00 97.23 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 1704.00 1.32 7.40 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 532.00 0.68 2.31 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 10630.00 53.10 46.14 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 587.00 2.19 2.55 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 425.00 32.15 1.84 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA body of pancreas (Tissue)