ENCFF242SEA

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR033TKS
Description: Part of ENCODE experiment ENCSR033TKS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 2031.00 7.11 8.82 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 1698.00 71.40 7.37 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 1487.00 62.61 6.45 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 64.00 4.41 0.28 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 216.00 0.17 0.94 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 289.00 0.22 1.25 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 233.00 0.18 1.01 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 430.00 0.33 1.87 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 1350.00 1.03 5.86 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 139.00 0.11 0.60 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 5170.00 2.55 22.44 86.99 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 397.00 0.20 1.72 45.37 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 308.00 0.15 1.34 71.13 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 2459.00 16.74 10.67 64.9 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 3188.00 90.36 13.84 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 3659.00 33.18 15.88 81.64 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 41.00 54.67 0.18 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 1.00 0.00 0.00 0.15 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 655.00 2.70 2.84 99.85 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 3221.00 13.30 13.98 52.07 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 158.25 0.96 0.69 22.8 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 600.10 3.63 2.60 81.98 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 6039.00 36.48 26.21 97.45 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 29284.00 76.42 127.12 89.54 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA body of pancreas (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 404.00 5.31 1.75 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA body of pancreas (Tissue)