ENCFF242SEA

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR033TKS
Description: Part of ENCODE experiment ENCSR033TKS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 266.97 0.00 1.16 29.57 SNHG25-206 lncRNA body of pancreas (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 755.94 0.01 3.28 36.82 SNHG25-206 lncRNA body of pancreas (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 16653.00 0.24 72.29 72.36 SNHG25-206 lncRNA body of pancreas (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 397.00 0.01 1.72 100.0 SNHG25-206 lncRNA body of pancreas (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 165.00 89.67 0.72 91.16 MIR155HG-205 lncRNA body of pancreas (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 40.00 0.26 0.17 100.0 ENST00000785178 lncRNA body of pancreas (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 117.00 1.06 0.51 66.48 ENST00000786284 lncRNA body of pancreas (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 8092.00 73.19 35.13 100.0 ENST00000786284 lncRNA body of pancreas (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 59.00 0.53 0.26 47.58 ENST00000786284 lncRNA body of pancreas (Tissue)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 1112.00 6.52 4.83 60.53 ENST00000788343 lncRNA body of pancreas (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 2067.34 34.30 8.97 53.13 ENST00000797550 lncRNA body of pancreas (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 1919.54 31.85 8.33 49.33 ENST00000797550 lncRNA body of pancreas (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 583.00 9.67 2.53 71.45 ENST00000797550 lncRNA body of pancreas (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 86181.00 80.82 374.09 88.38 MIR181A1HG-212 lncRNA body of pancreas (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 215.00 0.20 0.93 100.0 MIR181A1HG-212 lncRNA body of pancreas (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 144.00 15.43 0.63 100.0 C19orf48P-218 lncRNA body of pancreas (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 178.00 19.08 0.77 100.0 C19orf48P-218 lncRNA body of pancreas (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 2292.00 31.90 9.95 92.83 SNHG18-220 lncRNA body of pancreas (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 747.00 7.10 3.24 100.0 ENST00000817026 lncRNA body of pancreas (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 43.00 0.13 0.19 34.68 ENST00000823279 lncRNA body of pancreas (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 172.22 0.53 0.75 73.29 ENST00000823279 lncRNA body of pancreas (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 294.36 0.91 1.28 74.52 ENST00000823279 lncRNA body of pancreas (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 2560.00 7.95 11.11 94.19 ENST00000823279 lncRNA body of pancreas (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 76.53 0.24 0.33 22.98 ENST00000823279 lncRNA body of pancreas (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 222.59 0.69 0.97 45.15 ENST00000823279 lncRNA body of pancreas (Tissue)