ENCFF242SEA

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR033TKS
Description: Part of ENCODE experiment ENCSR033TKS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 1677.38 3.38 7.28 84.12 ENST00000756336 lncRNA body of pancreas (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 212.00 41.90 0.92 100.0 ENST00000756452 lncRNA body of pancreas (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 3663.00 38.20 15.90 100.0 ENST00000760093 lncRNA body of pancreas (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 674.00 7.03 2.93 100.0 ENST00000760093 lncRNA body of pancreas (Tissue)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 2882.00 64.37 12.51 88.49 SNHG14-356 lncRNA body of pancreas (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 28490.00 40.36 123.67 95.62 LINC02806-241 lncRNA body of pancreas (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 245.00 0.35 1.06 100.0 LINC02806-241 lncRNA body of pancreas (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 12216.00 17.31 53.03 67.29 LINC02806-241 lncRNA body of pancreas (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 8642.00 97.66 37.51 100.0 EHBP1-AS1-210 lncRNA body of pancreas (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 4612.00 47.74 20.02 100.0 ENST00000770398 lncRNA body of pancreas (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 1140.00 11.80 4.95 100.0 ENST00000770398 lncRNA body of pancreas (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 1332.00 13.79 5.78 100.0 ENST00000770398 lncRNA body of pancreas (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 1299.00 6.82 5.64 100.0 ENST00000771298 lncRNA body of pancreas (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 254.00 1.33 1.10 100.0 ENST00000771298 lncRNA body of pancreas (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 3493.00 18.34 15.16 89.82 ENST00000771298 lncRNA body of pancreas (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 4397.00 23.09 19.09 100.0 ENST00000771298 lncRNA body of pancreas (Tissue)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 1063.00 47.60 4.61 100.0 ENST00000772672 lncRNA body of pancreas (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 223.00 9.99 0.97 100.0 ENST00000772672 lncRNA body of pancreas (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 2619.00 56.82 11.37 100.0 ENST00000773843 lncRNA body of pancreas (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 1324087.00 52.94 5747.60 91.61 SNHG12-223 lncRNA body of pancreas (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 1167984.00 46.70 5069.99 98.78 SNHG12-223 lncRNA body of pancreas (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 382473.00 5.54 1660.24 100.0 SNHG25-206 lncRNA body of pancreas (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 6089342.00 88.15 26432.64 94.17 SNHG25-206 lncRNA body of pancreas (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 1354.00 0.02 5.88 100.0 SNHG25-206 lncRNA body of pancreas (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 837.53 0.01 3.64 51.7 SNHG25-206 lncRNA body of pancreas (Tissue)