ENCFF242SEA

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR033TKS
Description: Part of ENCODE experiment ENCSR033TKS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 5637.00 0.89 24.47 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 26617.00 4.21 115.54 65.57 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 65390.00 10.33 283.85 99.71 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 2484.00 0.39 10.78 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 1985.00 0.31 8.62 89.58 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 259.07 0.04 1.12 22.61 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 2466.00 0.39 10.70 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 1108.00 0.18 4.81 66.63 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 1850.00 0.29 8.03 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 120.00 0.02 0.52 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 1.00 0.00 0.00 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 2429.00 24.79 10.54 100.0 SNHG14-315 lncRNA body of pancreas (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 3047.00 31.10 13.23 92.81 SNHG14-315 lncRNA body of pancreas (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 546.00 5.57 2.37 64.08 SNHG14-315 lncRNA body of pancreas (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 2695.00 0.13 11.70 100.0 SNHG5-273 lncRNA body of pancreas (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 1203988.87 59.44 5226.28 63.12 SNHG5-273 lncRNA body of pancreas (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 51.00 0.00 0.22 100.0 SNHG5-273 lncRNA body of pancreas (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 52.00 0.00 0.23 100.0 SNHG5-273 lncRNA body of pancreas (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 789217.60 38.96 3425.84 39.84 SNHG5-273 lncRNA body of pancreas (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 10934.00 0.54 47.46 92.64 SNHG5-273 lncRNA body of pancreas (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 554.00 0.03 2.40 100.0 SNHG5-273 lncRNA body of pancreas (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 4487.00 0.22 19.48 100.0 SNHG5-273 lncRNA body of pancreas (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 167.00 0.01 0.72 100.0 SNHG5-273 lncRNA body of pancreas (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 8471.00 0.42 36.77 94.58 SNHG5-273 lncRNA body of pancreas (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 2839.00 0.63 12.32 97.46 MEG8-251 lncRNA body of pancreas (Tissue)