ENCFF242SEA

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR033TKS
Description: Part of ENCODE experiment ENCSR033TKS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 1179.00 61.47 5.12 100.0 MEG8-240 lncRNA body of pancreas (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 2.00 0.11 0.01 100.0 SNHG14-303 lncRNA body of pancreas (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 3973.00 83.82 17.25 100.0 MEG8-242 lncRNA body of pancreas (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 0.65 0.08 0.00 21.78 SNHG14-312 lncRNA body of pancreas (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 2.79 0.33 0.01 92.91 SNHG14-312 lncRNA body of pancreas (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 304.00 0.21 1.32 100.0 MEG8-244 lncRNA body of pancreas (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 1523.00 1.08 6.61 100.0 MEG8-244 lncRNA body of pancreas (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 138031.00 97.59 599.17 99.82 MEG8-244 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 3204.00 0.51 13.91 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 26725.00 4.22 116.01 98.85 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 814.92 0.13 3.54 71.11 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 986.00 0.16 4.28 71.19 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 120664.00 19.07 523.78 99.46 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 2045.00 0.32 8.88 73.46 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 122597.00 19.37 532.17 99.43 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 32270.00 5.10 140.08 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 89748.00 14.18 389.58 99.93 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 409.00 0.06 1.78 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 57.00 0.01 0.25 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 1391.00 0.22 6.04 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 81.00 0.01 0.35 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 148.00 0.02 0.64 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 823.00 0.13 3.57 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 52600.00 8.31 228.33 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 37.00 0.01 0.16 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)