ENCFF242SEA

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR033TKS
Description: Part of ENCODE experiment ENCSR033TKS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 545.00 24.60 2.37 100.0 MEG8-222 lncRNA body of pancreas (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 154.00 6.95 0.67 100.0 MEG8-222 lncRNA body of pancreas (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 15095.00 61.27 65.52 97.51 SNHG14-224 lncRNA body of pancreas (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 1193.00 4.84 5.18 99.92 SNHG14-224 lncRNA body of pancreas (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 1431.00 5.81 6.21 100.0 SNHG14-224 lncRNA body of pancreas (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 353.00 1.43 1.53 99.72 SNHG14-224 lncRNA body of pancreas (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 1126.00 4.57 4.89 53.16 SNHG14-224 lncRNA body of pancreas (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 866.00 3.52 3.76 92.82 SNHG14-224 lncRNA body of pancreas (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 510.00 2.07 2.21 59.79 SNHG14-224 lncRNA body of pancreas (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 25721.01 17.06 111.65 57.67 5S_rRNA.20-201 rRNA pseudogene body of pancreas (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 974.00 7.76 4.23 100.0 HSPA9-211 retained intron body of pancreas (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 3959.00 31.55 17.19 62.58 HSPA9-211 retained intron body of pancreas (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 4431.00 49.90 19.23 100.0 DNM3OS-205 lncRNA body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 7781.00 1.24 33.78 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 532.00 0.08 2.31 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 1419.00 0.23 6.16 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 8987.00 1.43 39.01 91.15 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 42.00 0.01 0.18 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 98.00 0.02 0.43 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 111.00 0.02 0.48 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 508146.00 80.94 2205.76 99.95 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 512.00 0.08 2.22 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 12115.00 1.93 52.59 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 1257.00 0.20 5.46 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 130.00 0.02 0.56 100.0 GAS5-230 retained intron body of pancreas (Tissue)