ENCFF242SEA

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR033TKS
Description: Part of ENCODE experiment ENCSR033TKS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 5577.00 2.88 24.21 69.72 ENST00000565336 lncRNA body of pancreas (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 3119.00 0.51 13.54 100.0 RBMX-210 retained intron body of pancreas (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 620.00 0.10 2.69 100.0 RBMX-210 retained intron body of pancreas (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 4208.00 0.69 18.27 100.0 RBMX-210 retained intron body of pancreas (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 323310.00 53.38 1403.43 54.77 RBMX-210 retained intron body of pancreas (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 433.00 14.90 1.88 100.0 RPL4-214 retained intron body of pancreas (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 1315.00 45.24 5.71 100.0 RPL4-214 retained intron body of pancreas (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 258.00 0.57 1.12 100.0 POLG-DT-202 lncRNA body of pancreas (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 22552.05 49.86 97.89 60.3 POLG-DT-202 lncRNA body of pancreas (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 31533.76 69.72 136.88 85.32 POLG-DT-202 lncRNA body of pancreas (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 421.00 3.24 1.83 100.0 ENST00000570843 lncRNA body of pancreas (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 558.00 56.48 2.42 100.0 MIR497HG-207 lncRNA body of pancreas (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 63586.00 97.29 276.01 97.91 MIR22HG-212 lncRNA body of pancreas (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 1329.00 1.10 5.77 44.3 SNORD53B-201 snoRNA body of pancreas (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 112320.00 93.10 487.56 96.74 SNORD53B-201 snoRNA body of pancreas (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 1671.00 1.39 7.25 55.7 SNORD53B-201 snoRNA body of pancreas (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 779.00 73.56 3.38 100.0 ENST00000578036 lncRNA body of pancreas (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 315.00 70.63 1.37 100.0 RPL23A-207 protein coding body of pancreas (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 391.00 97.26 1.70 100.0 MIR744-201 miRNA body of pancreas (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 201.00 50.38 0.87 100.0 MIR378C-201 miRNA body of pancreas (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 1582.00 75.77 6.87 83.66 MIR142HG-201 lncRNA body of pancreas (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 59.00 2.83 0.26 10.39 MIR142HG-201 lncRNA body of pancreas (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 270.49 0.01 1.17 40.31 RPL23A-208 retained intron body of pancreas (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 551.20 0.02 2.39 66.09 RPL23A-208 retained intron body of pancreas (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 2239935.00 91.38 9723.12 94.18 RPL23A-208 retained intron body of pancreas (Tissue)