ENCFF242SEA

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR033TKS
Description: Part of ENCODE experiment ENCSR033TKS. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 6958.00 3.55 30.20 100.0 WDR74-204 protein coding body of pancreas (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 7792.00 3.97 33.82 59.53 WDR74-204 protein coding body of pancreas (Tissue)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 756.00 40.08 3.28 100.0 HSPA8-211 retained intron body of pancreas (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 190.00 12.86 0.82 100.0 SCARNA9-201 lncRNA body of pancreas (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 22743.00 90.62 98.72 100.0 TAF1D-215 retained intron body of pancreas (Tissue)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 4069.00 70.48 17.66 100.0 HSPA8-215 retained intron body of pancreas (Tissue)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 211.00 3.65 0.92 100.0 HSPA8-215 retained intron body of pancreas (Tissue)
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 644.00 18.08 2.80 100.0 RPS2-215 retained intron body of pancreas (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 249601.00 74.55 1083.47 76.48 ENST00000548801 lncRNA body of pancreas (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 1213.00 22.86 5.27 100.0 ENST00000554988 lncRNA body of pancreas (Tissue)
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 598.00 11.27 2.60 100.0 ENST00000554988 lncRNA body of pancreas (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 1319.00 24.85 5.73 100.0 ENST00000554988 lncRNA body of pancreas (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 993.00 1.81 4.31 100.0 SNHG14-220 retained intron body of pancreas (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 605.00 1.10 2.63 100.0 SNHG14-220 retained intron body of pancreas (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 308.00 0.56 1.34 100.0 SNHG14-220 retained intron body of pancreas (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 50282.00 91.41 218.26 100.0 SNHG14-220 retained intron body of pancreas (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 7881.00 99.43 34.21 100.0 TEKT4P2-201 transcribed unprocessed pseudogene body of pancreas (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 996.00 2.81 4.32 100.0 RPL4-202 retained intron body of pancreas (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 2020.00 5.70 8.77 100.0 RPL4-202 retained intron body of pancreas (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 698.00 1.97 3.03 100.0 RPL4-202 retained intron body of pancreas (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 26887.00 75.90 116.71 91.23 RPL4-202 retained intron body of pancreas (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 2074.00 2.80 9.00 100.0 ENST00000563103 lncRNA body of pancreas (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 997.00 9.06 4.33 100.0 RPL4-207 retained intron body of pancreas (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 4890.00 44.44 21.23 100.0 RPL4-207 retained intron body of pancreas (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 180657.00 93.25 784.20 99.09 ENST00000565336 lncRNA body of pancreas (Tissue)